Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p03920 Brassica napus
A10p28180 Brassica napus
Aa31LG3G17990 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2354 Anthoceros agrestis
Actinidia18451 Actinidia chinensis
Ah.01g011460 Amaranthus hybridus
AL6G19250 Arabidopsis lyrata
Aqoxy3G04336 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.JXP1KB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LXEK1C Arachis hypogaea
AT5G08540 Arabidopsis thaliana
ATR0124G008 Amborella trichopoda
Atru.chr11.38 Acer truncatum
AUR62017757 Chenopodium quinoa
AUR62032894 Chenopodium quinoa
BcaB01g05586 Brassica carinata
BcaB01g05587 Brassica carinata
BcaB08g37247 Brassica carinata
BolC3t12972H Brassica oleracea
BolC9t59586H Brassica oleracea
BraA03t09738Z Brassica rapa
BraA10t44867Z Brassica rapa
C03p04410 Brassica napus
C09p68390 Brassica napus
CANSAT78G1147 Cannabis sativa
CARHR204440 Cardamine hirsuta
Carub.0006s0750 Capsella rubella
Ca_12345_v3 Cicer arietinum L.
Ca_12346_v3 Cicer arietinum L.
CBR_g39443 Chara braunii
Cc00_g03890 Coffea canephora
Cc00_g03900 Coffea canephora
Cc11_g00390 Coffea canephora
CDE05G2109 Ceratophyllum demersum
CDE05G2447 Ceratophyllum demersum
Ciclev10015886m.g Citrus clementina
CiPaw.16G000600 Carya illinoinensis
ClCG11G012770 Citrullus lanatus
COL.COLO4_33151 Corchorus olitorius
Cpa.g.sc221.15 Carica papaya
Cre09.g402950 Chlamydomonas reinhardtii
CsaV3_5G029150 Cucumis sativus L.
CSS0009404 Camellia sinensis var. sinensis
CSS0028662 Camellia sinensis var. sinensis
DCAR_023495 Daucus carota
Dinv17655 Davidia involucrata
Duzib052G0598 Durio zibethinus
Duzib248G0811 Durio zibethinus
ECA246G5176 Erigeron canadensis
EL10Ac9g23020 Beta vulgaris
Eucgr.J00330 Eucalyptus grandis
FAN01G2591 Fragaria x ananassa
FAN03G0776 Fragaria x ananassa
FAN07G0818 Fragaria x ananassa
FAN14G4394 Fragaria x ananassa
FAN17G1859 Fragaria x ananassa
FAN28G1115 Fragaria x ananassa
FvH4_4g37340 Fragaria vesca
Glyma.09G286000 Glycine max
Glyma.20G000300 Glycine max
Gohir.A03G167900 Gossypium hirsutum
Gohir.D02G191000 Gossypium hirsutum
Gorai.005G213800 Gossypium raimondii
GSVIVG01034351001 Vitis vinifera
HanXRQChr01g0001451 Helianthus annuus
HanXRQChr04g0099271 Helianthus annuus
HanXRQChr06g0171581 Helianthus annuus
Haze_17397 Corylus avellana
Hma1.2p1_3386F.1_g335770 Hydrangea macrophylla
Hma1.2p1_3386F.1_g335780 Hydrangea macrophylla
HPP92_007317 Vanilla planifolia
Lalb_Chr04g0259081 Lupinus albus
Lalb_Chr10g0094691 Lupinus albus
Lj2g0013395 Lotus japonicus
Lj3A844T51 Lonicera japonica
Lsat_1_v5_gn_3_35240 Lactuca sativa
Manes.04G160800 Manihot esculenta
Mapoly0067s0100 Marchantia polymorpha
Mapoly0067s0101 Marchantia polymorpha
Mapoly0067s0102 Marchantia polymorpha
Mapoly0067s0103 Marchantia polymorpha
Mapoly0169s0014 Marchantia polymorpha
MBI03_g11900_MAGBIO Magnolia biondii
MD13G1000800 Malus domestica
MD16G1004900 Malus domestica
Medtr1g039490 Medicago truncatula
MELO3C011767.2 Cucumis melo
Migut.E00589 Erythranthe guttata
MSTRG.2087 Avicennia marina
Nitab4.5_0000067g0040 Nicotiana tabacum
Nitab4.5_0003034g0040 Nicotiana tabacum
Nn1g04118 Nelumbo nucifera
Nn3g18536 Nelumbo nucifera
Nn5g29101 Nelumbo nucifera
Nn7g36511 Nelumbo nucifera
Oeu006323.1 Olea europaea
Oeu027937.2 Olea europaea
Os04g0527800 Oryza sativa ssp. japonica
Peaxi162Scf00655g00330 Petunia axillaris
PGR044G0613 Punica granatum
Phvul.003G000300 Phaseolus vulgaris
Potri.010G254800 Populus trichocarpa
Pp3c3_33330 Physcomitrium patens
PRCOL_00005587 Prasinoderma coloniale
Prupe.1G351900 Prunus persica
Psat0s5832g0080 Pisum sativum
Psat5g249280 Pisum sativum
PSO063G1005 Papaver somniferum
PSO782G4176 Papaver somniferum
QL01p000318 Quercus lobata
RcHm_v2.0_Chr1g0316621 Rosa chinensis
RcHm_v2.0_Chr3g0483721 Rosa chinensis
RcHm_v2.0_Chr3g0483731 Rosa chinensis
RcHm_v2.0_Chr4g0403031 Rosa chinensis
RcHm_v2.0_Chr4g0447201 Rosa chinensis
RcHm_v2.0_Chr6g0263291 Rosa chinensis
Rhsim04G0130700 Rhododendron simsii
Sabra08G0000800 Salix brachista
Sabra10G0198100 Salix brachista
SalBow1G0093 Salvia bowleyana
SalBow2G1531 Salvia bowleyana
Sc06g0007780 Simmondsia chinensis
Sed0014845 Sechium edule
Sed0020094 Sechium edule
SEGI_15080 Sequoiadendron giganteum
SEGI_28687 Sequoiadendron giganteum
SGA_v2.0_scaffold34G13663 Striga asiatica
SHI21160 Sapria himalayana
SHI21161 Sapria himalayana
SHI21163 Sapria himalayana
SMO367G0125 Selaginella moellendorffii
Solyc02g049070.4 Solanum lycopersicum
Sopen02g008300 Solanum pennellii
Sp6g34350 Schrenkiella parvula
TAR622G1118 Trochodendron aralioides
THA.LOC104800388 Tarenaya hassleriana
Thecc.02G152000 Theobroma cacao
Thhalv10013959m.g Eutrema salsugineum
TPR.G15012 Trifolium pratense
TPR.G30235 Trifolium pratense
TPR.G39699 Trifolium pratense
TWI53G0012 Tripterygium wilfordii
unitig_27.g25294 Utricularia gibba
vmacro08834 Vaccinium macrocarpon
Zm00001eb076700 Zea mays

User provided reference genes

Program Settings