Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p21200 Brassica napus
A08p05180 Brassica napus
A08p09670 Brassica napus
Aa31LG10G5580 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2360 Anthoceros agrestis
Actinidia01056 Actinidia chinensis
Ah.07g203500 Amaranthus hybridus
AL1G54730 Arabidopsis lyrata
AL8G32340 Arabidopsis lyrata
Aqoxy2G01813 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AFL9DX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CG6LTA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JER3JH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R3ADAS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W6NXGM Arachis hypogaea
AT1G48160 Arabidopsis thaliana
ATR0730G183 Amborella trichopoda
Atru.chr4.3129 Acer truncatum
Atru.chr4.92 Acer truncatum
AUR62002533 Chenopodium quinoa
AUR62023660 Chenopodium quinoa
BcaB04g17462 Brassica carinata
BcaC01g01495 Brassica carinata
BcaC05g27594 Brassica carinata
BcaC07g37169 Brassica carinata
BcaC08g43007 Brassica carinata
BolC5t32295H Brassica oleracea
BolC6t35384H Brassica oleracea
BolC8t47359H Brassica oleracea
BraA05t21026Z Brassica rapa
BraA08t32536Z Brassica rapa
C05p35790 Brassica napus
C06p02560 Brassica napus
C08p05420 Brassica napus
CAN.G567.34 Capsicum annuum
CANSAT35G0272 Cannabis sativa
CARHR037790 Cardamine hirsuta
Carub.0001s3725 Capsella rubella
Ca_02362_v3 Cicer arietinum L.
CBR_g39024 Chara braunii
Cc07_g19070 Coffea canephora
CDE05G0439 Ceratophyllum demersum
Cfa006455 Carpinus fangiana
Cfa023211 Carpinus fangiana
Ciclev10006189m.g Citrus clementina
CiPaw.01G130900 Carya illinoinensis
ClCG04G007440 Citrullus lanatus
ClCG05G006830 Citrullus lanatus
COL.COLO4_30940 Corchorus olitorius
Cpa.g.sc146.40 Carica papaya
Cre02.g095070 Chlamydomonas reinhardtii
CsaV3_3G015480 Cucumis sativus L.
CsaV3_4G025830 Cucumis sativus L.
CSS0027522 Camellia sinensis var. sinensis
CSS0047604 Camellia sinensis var. sinensis
DCAR_006510 Daucus carota
Dinv09552 Davidia involucrata
Dinv10386 Davidia involucrata
Dinv29526 Davidia involucrata
Duzib192G0082 Durio zibethinus
Duzib235G0490 Durio zibethinus
ECA246G1588 Erigeron canadensis
EL10Ac3g06230 Beta vulgaris
EL10As1g23068 Beta vulgaris
Eucgr.G02037 Eucalyptus grandis
FAN07G0799 Fragaria x ananassa
FAN12G1005 Fragaria x ananassa
FvH4_4g21210 Fragaria vesca
Glyma.02G064900 Glycine max
Glyma.16G146000 Glycine max
Gohir.A06G195300 Gossypium hirsutum
Gohir.D06G202900 Gossypium hirsutum
Gorai.010G236800 Gossypium raimondii
GSVIVG01017602001 Vitis vinifera
GSVIVG01017663001 Vitis vinifera
HanXRQChr06g0166421 Helianthus annuus
HanXRQChr17g0534691 Helianthus annuus
Hma1.2p1_0013F.1_g007820 Hydrangea macrophylla
HPP92_019515 Vanilla planifolia
Lalb_Chr07g0181821 Lupinus albus
Lalb_Chr13g0298851 Lupinus albus
Lj4g0016109 Lotus japonicus
Lsat_1_v5_gn_3_12780 Lactuca sativa
Lsat_1_v5_gn_6_83381 Lactuca sativa
Manes.17G016100 Manihot esculenta
Mapoly0004s0269 Marchantia polymorpha
MBI07_g26367_MAGBIO Magnolia biondii
MBI19_g06603_MAGBIO Magnolia biondii
MCO01G268 Micromonas commoda
MD13G1001700 Malus domestica
MD13G1143900 Malus domestica
MD13G1144000 Malus domestica
Medtr7g096570 Medicago truncatula
MELO3C006747.2 Cucumis melo
MELO3C033488.2 Cucumis melo
Migut.N00575 Erythranthe guttata
MSTRG.12184 Avicennia marina
Nitab4.5_0002367g0140 Nicotiana tabacum
Nitab4.5_0002793g0070 Nicotiana tabacum
Nn3g18945 Nelumbo nucifera
Oeu009981.1 Olea europaea
Os06g0342100 Oryza sativa ssp. japonica
Peaxi162Scf00074g00538 Petunia axillaris
PGR044G0309 Punica granatum
PGSC0003DMG400012133 Solanum tuberosum
Phvul.004G071200 Phaseolus vulgaris
Phvul.004G071300 Phaseolus vulgaris
Potri.012G045500 Populus trichocarpa
Potri.015G036700 Populus trichocarpa
Pp3c3_17800 Physcomitrium patens
PRCOL_00001126 Prasinoderma coloniale
Prupe.8G102200 Prunus persica
Psat0ss1196g0480 Pisum sativum
PSO478G2609 Papaver somniferum
PSO782G1806 Papaver somniferum
QL06p013825 Quercus lobata
RcHm_v2.0_Chr4g0426821 Rosa chinensis
RcHm_v2.0_Chr7g0219311 Rosa chinensis
Rhsim04G0247000 Rhododendron simsii
Sabra12G0031600 Salix brachista
Sabra15G0031200 Salix brachista
SalBow4G3050 Salvia bowleyana
Sc06g0001490 Simmondsia chinensis
Sed0026997 Sechium edule
SEGI_18361 Sequoiadendron giganteum
SGA_v2.0_scaffold198G41066 Striga asiatica
SGA_v2.0_scaffold36G14289 Striga asiatica
SMO352G0034 Selaginella moellendorffii
Solyc08g082740.4 Solanum lycopersicum
Sopen08g030970 Solanum pennellii
Sp1g35120 Schrenkiella parvula
TAR629G3462 Trochodendron aralioides
TAR636G2254 Trochodendron aralioides
THA.LOC104800562 Tarenaya hassleriana
Thecc.06G136600 Theobroma cacao
Thhalv10011800m.g Eutrema salsugineum
TPR.G12566 Trifolium pratense
TPR.G16114 Trifolium pratense
TPR.G22255 Trifolium pratense
TPR.G39662 Trifolium pratense
TWI38G0007 Tripterygium wilfordii
TWI63G0483 Tripterygium wilfordii
vmacro08000 Vaccinium macrocarpon
Zm00001eb066670 Zea mays
Zm00001eb081370 Zea mays

User provided reference genes

Program Settings