Gene: AT1G48160

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G48160
  • Transcript Identifier AT1G48160.1
  • Gene Type Coding gene
  • Location Chr1 : 17786779-17788286 : negative

Gene Family Information

  • ID HOM05D005190
  • #Genes/#Species 145/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G48160.1
  • uniprot Q943Z6

Descriptions

  • Description signal recognition particle 19 kDa protein, putative / SRP19
  • Computational description signal recognition particle 19 kDa protein, putative / SRP19, putative; FUNCTIONS IN: 7S RNA binding; INVOLVED IN: protein targeting, SRP-dependent cotranslational protein targeting to membrane; LOCATED IN: signal recognition particle, signal recognition particle, endoplasmic reticulum targeting; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Signal recognition particle, SRP19 subunit (InterPro:IPR002778); Has 500 Blast hits to 499 proteins in 236 species: Archae - 81; Bacteria - 0; Metazoa - 158; Fungi - 144; Plants - 60; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006617
IBA
Gene OntologySRP-dependent cotranslational protein targeting to membrane, signal sequence recognition1
GO:0006614
IEA
GOA DatabaseSRP-dependent cotranslational protein targeting to membrane
GO:0006614
IEA
InterProSRP-dependent cotranslational protein targeting to membrane

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008312
IEA
GOA Database7S RNA binding
GO:0008312
IBA
Gene Ontology7S RNA binding1
GO:0008312
IEA
InterPro7S RNA binding
GO:0003723
IEA
GOA DatabaseRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0005634
HDA
Gene Ontologynucleus2
GO:0005786
IEA
GOA Databasesignal recognition particle, endoplasmic reticulum targeting
GO:0005786
IBA
Gene Ontologysignal recognition particle, endoplasmic reticulum targeting1
GO:0048500
IEA
GOA Databasesignal recognition particle
GO:0048500
IEA
InterProsignal recognition particle

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002778 Signal recognition particle, SRP19 subunit
IPR036521 Signal recognition particle, subunit SRP19-like superfamily
Mapman id Description
23.3.1.1.1 Protein translocation.endoplasmic reticulum.co-translational insertion system.SRP (signal recognition particle) complex.component SRP19