Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p11570 Brassica napus
A05p31690 Brassica napus
Aa31LG8G4950 Aethionema arabicum
Actinidia37888 Actinidia chinensis
Ah.12g061970 Amaranthus hybridus
AL3G31260 Arabidopsis lyrata
AL7G34390 Arabidopsis lyrata
AL7G46060 Arabidopsis lyrata
Aqoxy3G00439 Aquilegia oxysepala
Aqoxy3G03966 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.QZK539 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UX5VDV Arachis hypogaea
AT3G18100 Arabidopsis thaliana
ATR0326G038 Amborella trichopoda
ATR0326G048 Amborella trichopoda
ATR0745G023 Amborella trichopoda
Atru.chr9.956 Acer truncatum
AUR62036514 Chenopodium quinoa
AUR62037061 Chenopodium quinoa
BcaC09g51390 Brassica carinata
BcaNung01760 Brassica carinata
BcaNung01761 Brassica carinata
BolC1t01339H Brassica oleracea
BolC5t33518H Brassica oleracea
BolC5t33549H Brassica oleracea
BraA01t01105Z Brassica rapa
BraA05t22002Z Brassica rapa
C01p13650 Brassica napus
C05p47270 Brassica napus
C05p48090 Brassica napus
CAN.G1129.29 Capsicum annuum
CANSAT80G0160 Cannabis sativa
CANSAT80G1729 Cannabis sativa
CANSAT80G2311 Cannabis sativa
CARHR093410 Cardamine hirsuta
Carub.0003s1783 Capsella rubella
Carub.0007s2150 Capsella rubella
CDE09G1004 Ceratophyllum demersum
CDE09G1040 Ceratophyllum demersum
CDE09G1365 Ceratophyllum demersum
Cfa019696 Carpinus fangiana
Ciclev10007362m.g Citrus clementina
CiPaw.15G139300 Carya illinoinensis
ClCG05G014580 Citrullus lanatus
ClCG10G007480 Citrullus lanatus
COL.COLO4_21587 Corchorus olitorius
COL.COLO4_21588 Corchorus olitorius
Cpa.g.sc3.430 Carica papaya
CsaV3_3G006700 Cucumis sativus L.
DCAR_005622 Daucus carota
DCAR_028712 Daucus carota
Dinv24639 Davidia involucrata
Dinv24641 Davidia involucrata
Dinv29937 Davidia involucrata
Duzib205G1340 Durio zibethinus
ECA233G2213 Erigeron canadensis
Eucgr.B00857 Eucalyptus grandis
FAN04G2630 Fragaria x ananassa
FAN08G2561 Fragaria x ananassa
FAN13G0793 Fragaria x ananassa
FAN18G0354 Fragaria x ananassa
FvH4_5g17070 Fragaria vesca
Glyma.07G100700 Glycine max
Glyma.09G178000 Glycine max
Gohir.A12G268300 Gossypium hirsutum
Gohir.D12G268700 Gossypium hirsutum
Gorai.008G288900 Gossypium raimondii
HanXRQChr05g0140931 Helianthus annuus
HanXRQChr07g0206911 Helianthus annuus
Haze_18792 Corylus avellana
Hma1.2p1_0669F.1_g200300 Hydrangea macrophylla
Hma1.2p1_0669F.1_g200310 Hydrangea macrophylla
HPP92_001863 Vanilla planifolia
HPP92_001875 Vanilla planifolia
HPP92_001876 Vanilla planifolia
HPP92_001896 Vanilla planifolia
Lalb_Chr22g0353341 Lupinus albus
Lj2g0017806 Lotus japonicus
Lj5A154G68 Lonicera japonica
Lsat_1_v5_gn_8_145621 Lactuca sativa
Manes.14G168800 Manihot esculenta
Mapoly0061s0069 Marchantia polymorpha
MBI10_g07295_MAGBIO Magnolia biondii
MCO01G602 Micromonas commoda
MD14G1233900 Malus domestica
Medtr6g080360 Medicago truncatula
MELO3C016456.2 Cucumis melo
Migut.D01451 Erythranthe guttata
Nitab4.5_0001158g0050 Nicotiana tabacum
Nitab4.5_0012734g0010 Nicotiana tabacum
Nn4g24098 Nelumbo nucifera
Oeu040446.1 Olea europaea
Os07g0136800 Oryza sativa ssp. japonica
Os07g0137000 Oryza sativa ssp. japonica
Os07g0139500 Oryza sativa ssp. japonica
Peaxi162Scf00683g00242 Petunia axillaris
PGR083G0229 Punica granatum
PGSC0003DMG400005657 Solanum tuberosum
Phvul.003G004600 Phaseolus vulgaris
Phvul.004G151600 Phaseolus vulgaris
Potri.015G041500 Populus trichocarpa
Pp3c13_8880 Physcomitrium patens
PRCOL_00001545 Prasinoderma coloniale
Prupe.5G230100 Prunus persica
Psat1g033720 Pisum sativum
PSO541G5122 Papaver somniferum
PSO675G7584 Papaver somniferum
QL10p027571 Quercus lobata
RcHm_v2.0_Chr7g0178781 Rosa chinensis
RcHm_v2.0_Chr7g0230201 Rosa chinensis
Rhsim13G0100900 Rhododendron simsii
Sabra15G0055600 Salix brachista
Sabra15G0063200 Salix brachista
SalBow1G8605 Salvia bowleyana
Sc06g0002030 Simmondsia chinensis
Sc06g0002040 Simmondsia chinensis
Sed0010738 Sechium edule
Sed0017978 Sechium edule
Sed0027815 Sechium edule
SEGI_11728 Sequoiadendron giganteum
SGA_v2.0_scaffold168G38494 Striga asiatica
SGA_v2.0_scaffold75G25014 Striga asiatica
Solyc03g119050.4 Solanum lycopersicum
Sopen03g037940 Solanum pennellii
Sp3g16220 Schrenkiella parvula
Sp7g18220 Schrenkiella parvula
TAR622G0602 Trochodendron aralioides
THA.LOC104821834 Tarenaya hassleriana
Thecc.03G047800 Theobroma cacao
Thhalv10020020m.g Eutrema salsugineum
TPR.G14599 Trifolium pratense
TPR.G14603 Trifolium pratense
TPR.G21383 Trifolium pratense
TPR.G22856 Trifolium pratense
TPR.G22866 Trifolium pratense
TPR.G34400 Trifolium pratense
TWI60G1411 Tripterygium wilfordii
TWI81G0236 Tripterygium wilfordii
unitig_736.g22463 Utricularia gibba
vmacro07281 Vaccinium macrocarpon
vmacro09847 Vaccinium macrocarpon
vmacro09848 Vaccinium macrocarpon
vmacro17791 Vaccinium macrocarpon
VMungo0464G1729 Vigna mungo
Zm00001eb299750 Zea mays

User provided reference genes

Program Settings