Gene: AT3G18100

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G18100
  • Transcript Identifier AT3G18100.4
  • Gene Type Coding gene
  • Location Chr3 : 6201657-6204583 : positive

Gene Family Information

  • ID HOM05D005181
  • #Genes/#Species 145/88
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G18100.4
  • symbol MYB4R1
  • Alias AtMYB4R1,myb domain protein 4R1
  • uniprot Q9LV31

Descriptions

  • Description myb domain protein 4r1
  • Computational description myb domain protein 4r1 (MYB4R1); CONTAINS InterPro DOMAIN/s: MYB-like (InterPro:IPR017877), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb transcription factor (InterPro:IPR015495), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-3 (TAIR:AT3G09370.2); Has 22862 Blast hits to 8555 proteins in 571 species: Archae - 0; Bacteria - 1576; Metazoa - 2254; Fungi - 1468; Plants - 12920; Viruses - 9; Other Eukaryotes - 4635 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IBA
TAS
Gene Ontologyregulation of transcription, DNA-templated1 2
GO:0006357
IEA
GOA Databaseregulation of transcription by RNA polymerase II

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity1
GO:0000981
IBA
Gene OntologyDNA-binding transcription factor activity, RNA polymerase II-specific2
GO:0000978
IBA
Gene OntologyRNA polymerase II cis-regulatory region sequence-specific DNA binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001005 SANT/Myb domain
IPR009057 Homeobox-like domain superfamily
IPR017930 Myb domain
Mapman id Description
15.3.3.7.3 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.SNAP snRNA transcription factor complex.component SNAPC4