Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p05380 Brassica napus
Aa31LG10G13430 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.212 Anthoceros agrestis
Actinidia02264 Actinidia chinensis
AL5G35490 Arabidopsis lyrata
Aqoxy2G00366 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2RH035 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LQLC9G Arachis hypogaea
AT3G54440 Arabidopsis thaliana
ATR0745G067 Amborella trichopoda
ATR0980G001 Amborella trichopoda
ATR0980G009 Amborella trichopoda
Atru.chr12.1338 Acer truncatum
Atru.chr12.1339 Acer truncatum
AUR62026862 Chenopodium quinoa
AUR62032651 Chenopodium quinoa
BcaB02g08488 Brassica carinata
BcaC02g09069 Brassica carinata
BcaC08g43326 Brassica carinata
BolC4t25382H Brassica oleracea
BraA04t16238Z Brassica rapa
C04p38070 Brassica napus
CAN.G176.1 Capsicum annuum
CANSAT56G3144 Cannabis sativa
CARHR164340 Cardamine hirsuta
Carub.0005s2104 Capsella rubella
Ca_23958_v3 Cicer arietinum L.
Ca_30885_v3 Cicer arietinum L.
CBR_g32018 Chara braunii
Cc02_g30230 Coffea canephora
CDE08G0398 Ceratophyllum demersum
Cfa010916 Carpinus fangiana
Cfa026367 Carpinus fangiana
Ciclev10027821m.g Citrus clementina
Ciclev10030068m.g Citrus clementina
CiPaw.13G013600 Carya illinoinensis
ClCG05G026800 Citrullus lanatus
COL.COLO4_20752 Corchorus olitorius
Cpa.g.sc540.3 Carica papaya
Cpa.g.sc540.4 Carica papaya
Cre08.g379450 Chlamydomonas reinhardtii
CsaV3_5G036760 Cucumis sativus L.
CSS0001243 Camellia sinensis var. sinensis
CSS0018226 Camellia sinensis var. sinensis
CSS0027518 Camellia sinensis var. sinensis
CSS0041800 Camellia sinensis var. sinensis
DCAR_006636 Daucus carota
Dinv32028 Davidia involucrata
Duzib114G0621 Durio zibethinus
ECA238G0687 Erigeron canadensis
EL10Ac2g02802 Beta vulgaris
Eucgr.J01181 Eucalyptus grandis
FAN03G1408 Fragaria x ananassa
FAN06G0154 Fragaria x ananassa
FAN10G2928 Fragaria x ananassa
FAN10G3804 Fragaria x ananassa
FvH4_4g11040 Fragaria vesca
FvH4_7g03060 Fragaria vesca
Glyma.13G197000 Glycine max
Gohir.A06G175300 Gossypium hirsutum
Gohir.D06G185100 Gossypium hirsutum
Gorai.010G216500 Gossypium raimondii
GSVIVG01013489001 Vitis vinifera
HanXRQChr14g0446561 Helianthus annuus
Haze_03042 Corylus avellana
Hma1.2p1_1202F.1_g266800 Hydrangea macrophylla
Hma1.2p1_1202F.1_g266810 Hydrangea macrophylla
Hma1.2p1_1202F.1_g266830 Hydrangea macrophylla
HPP92_012095 Vanilla planifolia
Hund27779 Selenicereus undatus
Hund27782 Selenicereus undatus
Lalb_Chr01g0007751 Lupinus albus
Lj3g0016153 Lotus japonicus
Lj9C664G6 Lonicera japonica
Lsat_1_v5_gn_1_113260 Lactuca sativa
Lsat_1_v5_gn_1_115820 Lactuca sativa
Lsat_1_v5_gn_2_30340 Lactuca sativa
Lsat_1_v5_gn_2_52800 Lactuca sativa
Lsat_1_v5_gn_2_64381 Lactuca sativa
Lsat_1_v5_gn_3_132500 Lactuca sativa
Lsat_1_v5_gn_3_137840 Lactuca sativa
Lsat_1_v5_gn_3_3641 Lactuca sativa
Lsat_1_v5_gn_4_130540 Lactuca sativa
Lsat_1_v5_gn_5_181001 Lactuca sativa
Lsat_1_v5_gn_9_100881 Lactuca sativa
Lsat_1_v5_gn_9_95981 Lactuca sativa
Manes.04G159700 Manihot esculenta
Mapoly0086s0033 Marchantia polymorpha
MBI09_g12849_MAGBIO Magnolia biondii
MCO01G649 Micromonas commoda
MD02G1287500 Malus domestica
MD07G1039900 Malus domestica
MD07G1040000 Malus domestica
MD07G1040100 Malus domestica
Medtr8g039160 Medicago truncatula
MELO3C012472.2 Cucumis melo
Migut.B01228 Erythranthe guttata
MSTRG.20515 Avicennia marina
Nitab4.5_0000013g0140 Nicotiana tabacum
Nitab4.5_0002123g0040 Nicotiana tabacum
Nitab4.5_0002123g0050 Nicotiana tabacum
Nitab4.5_0002123g0060 Nicotiana tabacum
Nn7g36668 Nelumbo nucifera
Oeu042660.1 Olea europaea
Os01g0952600 Oryza sativa ssp. japonica
Peaxi162Scf00767g00521 Petunia axillaris
PGR044G1764 Punica granatum
Phvul.011G206800 Phaseolus vulgaris
Potri.001G027400 Populus trichocarpa
Potri.003G196500 Populus trichocarpa
Pp3c7_1630 Physcomitrium patens
PRCOL_00006392 Prasinoderma coloniale
Prupe.2G035600 Prunus persica
Prupe.2G035800 Prunus persica
Psat4g144800 Pisum sativum
PSO339G5424 Papaver somniferum
QL04p017903 Quercus lobata
RcHm_v2.0_Chr1g0324211 Rosa chinensis
RcHm_v2.0_Chr1g0324221 Rosa chinensis
RcHm_v2.0_Chr1g0324261 Rosa chinensis
Rhsim01G0124100 Rhododendron simsii
Sabra01G0019900 Salix brachista
Sabra03G0146500 Salix brachista
Sc14g0005780 Simmondsia chinensis
Sed0008595 Sechium edule
SEGI_06402 Sequoiadendron giganteum
SEGI_07313 Sequoiadendron giganteum
SEGI_07839 Sequoiadendron giganteum
SGA_v2.0_scaffold124G33611 Striga asiatica
SMO266G0060 Selaginella moellendorffii
Solyc08g014480.4 Solanum lycopersicum
Sopen08g005470 Solanum pennellii
Sp5g07980 Schrenkiella parvula
TAR636G0153 Trochodendron aralioides
TAR636G0412 Trochodendron aralioides
TAR636G2362 Trochodendron aralioides
THA.LOC104824194 Tarenaya hassleriana
Thecc.10G156500 Theobroma cacao
Thecc.10G157000 Theobroma cacao
Thhalv10010080m.g Eutrema salsugineum
TPR.G27820 Trifolium pratense
TWI38G0195 Tripterygium wilfordii
unitig_22.g5425 Utricularia gibba
vmacro12695 Vaccinium macrocarpon
vmacro12696 Vaccinium macrocarpon
VMungo1127G0803 Vigna mungo
Zm00001eb140720 Zea mays

User provided reference genes

Program Settings