Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p16540 Brassica napus
A07p41830 Brassica napus
Aa31LG4G6350 Aethionema arabicum
Aa31LG7G4800 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.948 Anthoceros agrestis
Actinidia07458 Actinidia chinensis
Actinidia09068 Actinidia chinensis
Actinidia29788 Actinidia chinensis
Actinidia37971 Actinidia chinensis
Ah.13g072510 Amaranthus hybridus
AL1G33470 Arabidopsis lyrata
AL2G36340 Arabidopsis lyrata
Aqoxy5G01046 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.76XKSK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7RQ6TB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B8YF15 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FBZU85 Arachis hypogaea
AT1G20540 Arabidopsis thaliana
AT1G76260 Arabidopsis thaliana
ATR0661G259 Amborella trichopoda
Atru.chr13.151 Acer truncatum
AUR62036885 Chenopodium quinoa
AUR62043554 Chenopodium quinoa
AUR62043921 Chenopodium quinoa
AUR62043922 Chenopodium quinoa
BcaB07g32052 Brassica carinata
BcaC05g25960 Brassica carinata
BcaC08g47124 Brassica carinata
BcaC08g47273 Brassica carinata
BNapus_Darmor_BZH_scaffold_170p00070 Brassica napus
BolC5t30611H Brassica oleracea
BolC6t40062H Brassica oleracea
BraA06t24760Z Brassica rapa
BraA07t31713Z Brassica rapa
C05p19110 Brassica napus
C06p50230 Brassica napus
CANSAT25G3513 Cannabis sativa
CANSAT54G1628 Cannabis sativa
CARHR021010 Cardamine hirsuta
CARHR069820 Cardamine hirsuta
Carub.0001s2001 Capsella rubella
Carub.0002s2315 Capsella rubella
Ca_15439_v3 Cicer arietinum L.
CBR_g17938 Chara braunii
Cc10_g00720 Coffea canephora
CDE02G3878 Ceratophyllum demersum
CDE04G2988 Ceratophyllum demersum
Cfa014063 Carpinus fangiana
Ciclev10001617m.g Citrus clementina
CiPaw.07G139500 Carya illinoinensis
ClCG00G005440 Citrullus lanatus
ClCG08G009490 Citrullus lanatus
ClCG08G009550 Citrullus lanatus
COL.COLO4_03999 Corchorus olitorius
Cpa.g.sc26.207 Carica papaya
Cre02.g109150 Chlamydomonas reinhardtii
Cre02.g109400 Chlamydomonas reinhardtii
CsaV3_6G031630 Cucumis sativus L.
CSS0013002 Camellia sinensis var. sinensis
CSS0029951 Camellia sinensis var. sinensis
DCAR_013911 Daucus carota
Dinv31933 Davidia involucrata
Duzib093G2109 Durio zibethinus
Duzib116G0540 Durio zibethinus
ECA238G2025 Erigeron canadensis
EL10Ac1g01978 Beta vulgaris
Eucgr.F03549 Eucalyptus grandis
FAN15G0307 Fragaria x ananassa
FAN20G0881 Fragaria x ananassa
FAN27G0843 Fragaria x ananassa
FvH4_2g37550 Fragaria vesca
Glyma.04G018500 Glycine max
Glyma.06G018800 Glycine max
Gohir.A05G254700 Gossypium hirsutum
Gohir.D05G256300 Gossypium hirsutum
Gorai.009G267800 Gossypium raimondii
GSVIVG01008680001 Vitis vinifera
HanXRQChr14g0428271 Helianthus annuus
Haze_22758 Corylus avellana
Haze_22764 Corylus avellana
Hma1.2p1_0507F.1_g168410 Hydrangea macrophylla
HPP92_008373 Vanilla planifolia
Hund05118 Selenicereus undatus
Lalb_Chr23g0265821 Lupinus albus
Lj1g0027661 Lotus japonicus
Lj4C805G13 Lonicera japonica
Lsat_1_v5_gn_2_6481 Lactuca sativa
Manes.18G005800 Manihot esculenta
Mapoly0054s0060 Marchantia polymorpha
MBI05_g05143_MAGBIO Magnolia biondii
MBI05_g41554_MAGBIO Magnolia biondii
MCO04G183 Micromonas commoda
MD08G1003000 Malus domestica
MD15G1002700 Malus domestica
Medtr3g115200 Medicago truncatula
MELO3C026544.2 Cucumis melo
Migut.C00955 Erythranthe guttata
MSTRG.27774 Avicennia marina
Nitab4.5_0000588g0150 Nicotiana tabacum
Nn4g22810 Nelumbo nucifera
Nn6g31745 Nelumbo nucifera
Oeu011330.2 Olea europaea
Os08g0554000 Oryza sativa ssp. japonica
Peaxi162Scf00893g00433 Petunia axillaris
PGR031G0259 Punica granatum
PGSC0003DMG400009976 Solanum tuberosum
Phvul.009G010100 Phaseolus vulgaris
Potri.002G011200 Populus trichocarpa
Potri.005G249800 Populus trichocarpa
PRCOL_00000380 Prasinoderma coloniale
Prupe.1G355000 Prunus persica
Psat5g011560 Pisum sativum
PSO170G0128 Papaver somniferum
PSO210G7270 Papaver somniferum
QL02p013958 Quercus lobata
QL02p013964 Quercus lobata
RcHm_v2.0_Chr6g0304181 Rosa chinensis
Rhsim06G0007900 Rhododendron simsii
Sabra05G0193300 Salix brachista
SalBow7G4394 Salvia bowleyana
Sc15g0004490 Simmondsia chinensis
Sed0022458 Sechium edule
SEGI_07968 Sequoiadendron giganteum
SEGI_12583 Sequoiadendron giganteum
SEGI_37952 Sequoiadendron giganteum
SGA_v2.0_scaffold108G30855 Striga asiatica
SGA_v2.0_scaffold275G46594 Striga asiatica
SHI08001 Sapria himalayana
SMO118G0316 Selaginella moellendorffii
Solyc04g082300.2 Solanum lycopersicum
Sopen04g035920 Solanum pennellii
Sp1g18250 Schrenkiella parvula
Sp5g31400 Schrenkiella parvula
TAR381G1664 Trochodendron aralioides
THA.LOC104813757 Tarenaya hassleriana
Thecc.08G057800 Theobroma cacao
Thhalv10008062m.g Eutrema salsugineum
Thhalv10018792m.g Eutrema salsugineum
TPR.G38213 Trifolium pratense
TWI36G1160 Tripterygium wilfordii
unitig_26.g9893 Utricularia gibba
vmacro11236 Vaccinium macrocarpon
vmacro11237 Vaccinium macrocarpon
vmacro21822 Vaccinium macrocarpon
vmacro21823 Vaccinium macrocarpon
VMungo1309G2329 Vigna mungo
Zm00001eb039840 Zea mays
Zm00001eb180420 Zea mays

User provided reference genes

Program Settings