Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p24390 Brassica napus
A04p32930 Brassica napus
A04p32940 Brassica napus
Aa31LG1G25370 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4407 Anthoceros agrestis
Actinidia11444 Actinidia chinensis
Ah.01g019270 Amaranthus hybridus
AL4G42470 Arabidopsis lyrata
AL5G17740 Arabidopsis lyrata
AL677U10020 Arabidopsis lyrata
Aqoxy5G00514 Aquilegia oxysepala
Aqoxy5G03459 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.K7ZH1T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X1H480 Arachis hypogaea
AT2G43650 Arabidopsis thaliana
AT3G28230 Arabidopsis thaliana
ATR0763G006 Amborella trichopoda
ATR0763G045 Amborella trichopoda
Atru.chr3.3232 Acer truncatum
Atru.chr4.1428 Acer truncatum
AUR62011304 Chenopodium quinoa
AUR62016753 Chenopodium quinoa
AUR62016951 Chenopodium quinoa
BcaB01g03369 Brassica carinata
BcaB06g29334 Brassica carinata
BcaB06g29336 Brassica carinata
BcaC01g05222 Brassica carinata
BolC4t28563H Brassica oleracea
BolC4t28565H Brassica oleracea
BraA03t11648Z Brassica rapa
BraA04t18751Z Brassica rapa
C03p29070 Brassica napus
C04p70610 Brassica napus
C04p70630 Brassica napus
CAN.G308.62 Capsicum annuum
CANSAT56G3616 Cannabis sativa
CARHR138830 Cardamine hirsuta
Carub.0004s2618 Capsella rubella
Ca_18642_v3 Cicer arietinum L.
CBR_g34512 Chara braunii
Cc03_g13950 Coffea canephora
CDE04G2996 Ceratophyllum demersum
Cfa015266 Carpinus fangiana
Ciclev10019145m.g Citrus clementina
CiPaw.02G100700 Carya illinoinensis
ClCG06G001090 Citrullus lanatus
COL.COLO4_09146 Corchorus olitorius
Cpa.g.sc114.8 Carica papaya
Cre09.g394399 Chlamydomonas reinhardtii
CsaV3_6G007040 Cucumis sativus L.
CSS0004898 Camellia sinensis var. sinensis
CSS0024905 Camellia sinensis var. sinensis
DCAR_019081 Daucus carota
Dinv04468 Davidia involucrata
Duzib084G1078 Durio zibethinus
Duzib128G0002 Durio zibethinus
ECA238G2929 Erigeron canadensis
EL10Ac9g21710 Beta vulgaris
Eucgr.H00313 Eucalyptus grandis
Eucgr.H00317 Eucalyptus grandis
FAN04G0894 Fragaria x ananassa
FAN08G2023 Fragaria x ananassa
FAN12G0411 Fragaria x ananassa
FAN12G0483 Fragaria x ananassa
FAN13G0846 Fragaria x ananassa
FAN18G4484 Fragaria x ananassa
FvH4_4g18081 Fragaria vesca
FvH4_5g27692 Fragaria vesca
Glyma.02G137100 Glycine max
Glyma.07G208300 Glycine max
Gohir.A04G120600 Gossypium hirsutum
Gohir.D04G162100 Gossypium hirsutum
Gorai.012G150100 Gossypium raimondii
GSVIVG01038137001 Vitis vinifera
HanXRQChr14g0439801 Helianthus annuus
Haze_01366 Corylus avellana
Hma1.2p1_0126F.1_g059250 Hydrangea macrophylla
Hma1.2p1_0150F.1_g066780 Hydrangea macrophylla
Hma1.2p1_0150F.1_g066790 Hydrangea macrophylla
Hma1.2p1_1145F.1_g261360 Hydrangea macrophylla
HPP92_014516 Vanilla planifolia
Hund05076 Selenicereus undatus
Hund06242 Selenicereus undatus
Lalb_Chr16g0384481 Lupinus albus
Lj1g0023120 Lotus japonicus
Lj4g0012801 Lotus japonicus
Lj7A489G23 Lonicera japonica
Lj7A489T32 Lonicera japonica
Lsat_1_v5_gn_2_46281 Lactuca sativa
Manes.16G069500 Manihot esculenta
Mapoly0041s0093 Marchantia polymorpha
MBI18_g06087_MAGBIO Magnolia biondii
MD04G1048900 Malus domestica
MD17G1177700 Malus domestica
Medtr4g087270 Medicago truncatula
MELO3C022426.2 Cucumis melo
Migut.N03070 Erythranthe guttata
Nitab4.5_0001802g0080 Nicotiana tabacum
Nitab4.5_0002129g0080 Nicotiana tabacum
Oeu018046.1 Olea europaea
Oeu018048.1 Olea europaea
Os01g0104800 Oryza sativa ssp. japonica
Peaxi162Scf00568g00417 Petunia axillaris
PGR142G4138 Punica granatum
Phvul.003G296300 Phaseolus vulgaris
Potri.013G125800 Populus trichocarpa
Pp3c13_22260 Physcomitrium patens
Prupe.1G206800 Prunus persica
Psat7g121360 Pisum sativum
PSO170G2549 Papaver somniferum
PSO302G0034 Papaver somniferum
QL10p054621 Quercus lobata
QL10p054628 Quercus lobata
QL10p054991 Quercus lobata
QL10p055599 Quercus lobata
QL10p055605 Quercus lobata
QL93p1902_0036 Quercus lobata
RcHm_v2.0_Chr7g0219421 Rosa chinensis
Rhsim13G0194600 Rhododendron simsii
Sabra13G0104700 Salix brachista
Sabra13G0105000 Salix brachista
Sabra13G0105200 Salix brachista
Sabra13G0105300 Salix brachista
SalBow1G2014 Salvia bowleyana
Sc08g0000580 Simmondsia chinensis
Sed0010490 Sechium edule
SEGI_33254 Sequoiadendron giganteum
SEGI_41310 Sequoiadendron giganteum
SGA_v2.0_scaffold289G47281 Striga asiatica
SHI10610 Sapria himalayana
SMO358G0450 Selaginella moellendorffii
SMO367G0368 Selaginella moellendorffii
Solyc11g072320.3 Solanum lycopersicum
Solyc11g072390.2 Solanum lycopersicum
Sopen11g029990 Solanum pennellii
Sopen11g030040 Solanum pennellii
Sp4g25750 Schrenkiella parvula
TAR636G1142 Trochodendron aralioides
TAR636G2681 Trochodendron aralioides
THA.LOC104803998 Tarenaya hassleriana
Thecc.05G215400 Theobroma cacao
Thhalv10001371m.g Eutrema salsugineum
TPR.G1297 Trifolium pratense
TPR.G23553 Trifolium pratense
TWI38G0332 Tripterygium wilfordii
vmacro03868 Vaccinium macrocarpon
VMungo0251G2998 Vigna mungo
Zm00001eb034060 Zea mays

User provided reference genes

Program Settings