Gene: AT2G43650
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G43650
- Transcript Identifier AT2G43650.1
- Gene Type Coding gene
- Location Chr2 : 18099430-18103147 : positive
Gene Family Information
- ID HOM05D005056
- #Genes/#Species 148/94
- Phylogenetic origin
- ID ORTHO05D006487
- #Genes/#Species 142/89
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT2G43650.1
- symbol EMB2777
- full_name EMBRYO DEFECTIVE 2777
- uniprot Q8L3P4
Descriptions
- Description Sas10/U3 ribonucleoprotein (Utp) family protein
- Computational description EMBRYO DEFECTIVE 2777 (EMB2777); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: gene silencing; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Sas10/Utp3/C1D (InterPro:IPR007146), Something about silencing protein 10 (Sas10), C-terminal (InterPro:IPR018972); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28230.2); Has 14657 Blast hits to 10395 proteins in 729 species: Archae - 127; Bacteria - 2247; Metazoa - 4743; Fungi - 2020; Plants - 661; Viruses - 159; Other Eukaryotes - 4700 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006364 | IMP | Gene Ontology | rRNA processing | 1 |
| GO:0000462 | IBA | Gene Ontology | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IPI | Gene Ontology | protein binding | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISM | Gene Ontology | nucleus | |
| GO:0005730 | IDA IBA | Gene Ontology | nucleolus | 1 2 |
| GO:0032040 | IBA | Gene Ontology | small-subunit processome | 2 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |