Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p12970 Brassica napus
Aa31LG9G1530 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.374 Anthoceros agrestis
Actinidia06042 Actinidia chinensis
Actinidia33975 Actinidia chinensis
AL3G42320 Arabidopsis lyrata
Aqoxy3G00882 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.IKM8ZR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JZED56 Arachis hypogaea
AT2G04700 Arabidopsis thaliana
ATR1101G065 Amborella trichopoda
Atru.chr8.2413 Acer truncatum
AUR62001211 Chenopodium quinoa
AUR62022118 Chenopodium quinoa
AUR62026990 Chenopodium quinoa
AUR62032082 Chenopodium quinoa
AUR62041855 Chenopodium quinoa
BcaB02g11482 Brassica carinata
BcaB06g27429 Brassica carinata
BcaC04g21225 Brassica carinata
BolC4t26254H Brassica oleracea
BraA04t16958Z Brassica rapa
C04p46660 Brassica napus
CAN.G206.60 Capsicum annuum
CANSAT21G0423 Cannabis sativa
CARHR102650 Cardamine hirsuta
CARHR102660 Cardamine hirsuta
Carub.0003s2630 Capsella rubella
Ca_04227_v3 Cicer arietinum L.
CBR_g4436 Chara braunii
Cc07_g02630 Coffea canephora
CDE04G0448 Ceratophyllum demersum
Cfa007472 Carpinus fangiana
Ciclev10013034m.g Citrus clementina
CiPaw.03G034300 Carya illinoinensis
ClCG00G001700 Citrullus lanatus
ClCG09G018640 Citrullus lanatus
COL.COLO4_06152 Corchorus olitorius
Cre03.g193950 Chlamydomonas reinhardtii
CsaV3_5G037480 Cucumis sativus L.
CSS0000898 Camellia sinensis var. sinensis
CSS0001095 Camellia sinensis var. sinensis
CSS0011814 Camellia sinensis var. sinensis
CSS0020716 Camellia sinensis var. sinensis
CSS0035672 Camellia sinensis var. sinensis
CSS0048463 Camellia sinensis var. sinensis
CSS0048749 Camellia sinensis var. sinensis
DCAR_011194 Daucus carota
Dinv33674 Davidia involucrata
Dinv35020 Davidia involucrata
Duzib147G0557 Durio zibethinus
Duzib264G0892 Durio zibethinus
ECA246G3539 Erigeron canadensis
EL10Ac7g18004 Beta vulgaris
Eucgr.J02172 Eucalyptus grandis
FAN02G1276 Fragaria x ananassa
FAN05G0554 Fragaria x ananassa
FAN09G0974 Fragaria x ananassa
FAN14G3542 Fragaria x ananassa
FvH4_6g50060 Fragaria vesca
Glyma.13G069100 Glycine max
Glyma.19G013800 Glycine max
Gohir.A07G217600 Gossypium hirsutum
Gohir.A09G024500 Gossypium hirsutum
Gohir.D07G224700 Gossypium hirsutum
Gohir.D09G023800 Gossypium hirsutum
Gorai.001G259100 Gossypium raimondii
Gorai.006G028000 Gossypium raimondii
GSVIVG01032540001 Vitis vinifera
HanXRQChr17g0548081 Helianthus annuus
Haze_14625 Corylus avellana
Hma1.2p1_0375F.1_g139040 Hydrangea macrophylla
HPP92_003737 Vanilla planifolia
Hund20034 Selenicereus undatus
Lalb_Chr02g0159811 Lupinus albus
Lalb_Chr06g0176451 Lupinus albus
Lalb_Chr21g0319261 Lupinus albus
Lj2g0024232 Lotus japonicus
Lsat_1_v5_gn_0_16560 Lactuca sativa
Lsat_1_v5_gn_4_180660 Lactuca sativa
Manes.15G180500 Manihot esculenta
Manes.17G120300 Manihot esculenta
Mapoly0037s0068 Marchantia polymorpha
MBI14_g12780_MAGBIO Magnolia biondii
MCO16G017 Micromonas commoda
MD09G1039900 Malus domestica
MD17G1040500 Malus domestica
Medtr6g008220 Medicago truncatula
MELO3C021510.2 Cucumis melo
Migut.H00159 Erythranthe guttata
Migut.K01356 Erythranthe guttata
MSTRG.23981 Avicennia marina
MSTRG.3309 Avicennia marina
Nitab4.5_0001952g0210 Nicotiana tabacum
Nitab4.5_0007185g0060 Nicotiana tabacum
Nn1g06334 Nelumbo nucifera
Nn3g17009 Nelumbo nucifera
Nn3g18376 Nelumbo nucifera
Nn4g22913 Nelumbo nucifera
Oeu031509.1 Olea europaea
Os09g0249900 Oryza sativa ssp. japonica
Peaxi162Scf00129g00821 Petunia axillaris
PGR083G2790 Punica granatum
Phvul.004G020500 Phaseolus vulgaris
Potri.001G350900 Populus trichocarpa
Pp3c3_28450 Physcomitrium patens
Pp3c4_19340 Physcomitrium patens
PRCOL_00001533 Prasinoderma coloniale
Prupe.3G278500 Prunus persica
Psat1g079560 Pisum sativum
PSO591G0214 Papaver somniferum
PSO832G3976 Papaver somniferum
QL02p078168 Quercus lobata
QL02p078176 Quercus lobata
QL93p0205_0142 Quercus lobata
RcHm_v2.0_Chr2g0170331 Rosa chinensis
Rhsim08G0061500 Rhododendron simsii
Rhsim10G0028000 Rhododendron simsii
Rhsim10G0028700 Rhododendron simsii
Sabra16G0230300 Salix brachista
SalBow1G8037 Salvia bowleyana
Sc06g0002600 Simmondsia chinensis
Sed0002098 Sechium edule
SEGI_15320 Sequoiadendron giganteum
SGA_v2.0_scaffold30G12503 Striga asiatica
SMO147G0038 Selaginella moellendorffii
Solyc02g087230.3 Solanum lycopersicum
Sopen02g031970 Solanum pennellii
Sp2g17120 Schrenkiella parvula
Sp7g01920 Schrenkiella parvula
TAR371G0568 Trochodendron aralioides
TAR484G0003 Trochodendron aralioides
TAR629G3150 Trochodendron aralioides
THA.LOC104805419 Tarenaya hassleriana
THA.LOC104822811 Tarenaya hassleriana
Thecc.04G003200 Theobroma cacao
Thhalv10005082m.g Eutrema salsugineum
Thhalv10027982m.g Eutrema salsugineum
TPR.G31460 Trifolium pratense
TWI36G0797 Tripterygium wilfordii
TWI56G1217 Tripterygium wilfordii
unitig_52.g17602 Utricularia gibba
unitig_62.g23432 Utricularia gibba
vmacro05790 Vaccinium macrocarpon
vmacro18227 Vaccinium macrocarpon
VMungo0464G2121 Vigna mungo
Zm00001eb099010 Zea mays
Zm00001eb373700 Zea mays

User provided reference genes

Program Settings