Gene: COL.COLO4_06152

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_06152
  • Transcript Identifier COL.rna4971
  • Gene Type Coding gene
  • Location AWUE01012618.1 : 122827-129991 : negative

Gene Family Information

  • ID HOM05D005035
  • #Genes/#Species 148/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna4971
  • GenBank OMP08773.1
  • id gene6124
  • gene_name COLO4_06152
  • uniprot A0A1R3KNU5

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0103012
IEA
GOA Databaseferredoxin-thioredoxin reductase activity
GO:0051539
IEA
GOA Database4 iron, 4 sulfur cluster binding
GO:0051536
IEA
GOA Databaseiron-sulfur cluster binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0016730
IEA
GOA Databaseoxidoreductase activity, acting on iron-sulfur proteins as donors
GO:0016730
IEA
InterProoxidoreductase activity, acting on iron-sulfur proteins as donors
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT2G04700
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G04700
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT2G04700

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004209 Ferredoxin thioredoxin reductase catalytic beta subunit
IPR001660 Sterile alpha motif domain
IPR013761 Sterile alpha motif/pointed domain superfamily
IPR036644 Ferredoxin thioredoxin reductase catalytic beta subunit superfamily
Mapman id Description
10.4.1.2.2 Redox homeostasis.thiol-based redox regulation.thioredoxin reductase activities.ferredoxin-dependent thioredoxin reductase (FTR) complex.subunit beta
17.1.1.4 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.rRNA processing factor (IRP1)