Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p33120 Brassica napus
Aa31LG4G90 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3356 Anthoceros agrestis
Actinidia21716 Actinidia chinensis
Actinidia32097 Actinidia chinensis
Ah.01g005800 Amaranthus hybridus
Ah.01g022080 Amaranthus hybridus
AL2G25330 Arabidopsis lyrata
AL2G41830 Arabidopsis lyrata
AL2G41840 Arabidopsis lyrata
Aqoxy2G02285 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1M6YYJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R367CR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VUMD9N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YYV7TY Arachis hypogaea
AT1G79730 Arabidopsis thaliana
ATR0661G470 Amborella trichopoda
Atru.chr1.3523 Acer truncatum
AUR62022205 Chenopodium quinoa
AUR62031914 Chenopodium quinoa
BcaC06g31994 Brassica carinata
BcaNung02135 Brassica carinata
BolC9t60139H Brassica oleracea
BraA10t45345Z Brassica rapa
C09p74080 Brassica napus
CAN.G1143.11 Capsicum annuum
CAN.G1143.12 Capsicum annuum
CAN.G1143.13 Capsicum annuum
CAN.G907.1 Capsicum annuum
CANSAT56G0983 Cannabis sativa
CARHR074670 Cardamine hirsuta
Carub.0002s2777 Capsella rubella
Ca_23262_v3 Cicer arietinum L.
Ca_23271_v3 Cicer arietinum L.
CBR_g48652 Chara braunii
CBR_g8033 Chara braunii
Cc04_g02560 Coffea canephora
CDE06G0689 Ceratophyllum demersum
CDE12G0264 Ceratophyllum demersum
Ciclev10025066m.g Citrus clementina
CiPaw.02G145800 Carya illinoinensis
ClCG09G000200 Citrullus lanatus
COL.COLO4_30512 Corchorus olitorius
Cpa.g.sc109.1 Carica papaya
Cpa.g.sc109.3 Carica papaya
Cre12.g520250 Chlamydomonas reinhardtii
CsaV3_7G035280 Cucumis sativus L.
CSS0033602 Camellia sinensis var. sinensis
DCAR_016188 Daucus carota
Dinv30436 Davidia involucrata
Duzib160G0376 Durio zibethinus
Duzib192G0488 Durio zibethinus
Duzib235G0505 Durio zibethinus
ECA247G2560 Erigeron canadensis
EL10Ac9g21206 Beta vulgaris
Eucgr.F03078 Eucalyptus grandis
FAN02G3590 Fragaria x ananassa
FAN05G1466 Fragaria x ananassa
FAN09G0199 Fragaria x ananassa
FAN14G4508 Fragaria x ananassa
FvH4_6g32381 Fragaria vesca
Glyma.07G015500 Glycine max
Glyma.08G201000 Glycine max
Gohir.A02G117400 Gossypium hirsutum
Gohir.A09G081200 Gossypium hirsutum
Gohir.D03G057900 Gossypium hirsutum
Gohir.D09G081300 Gossypium hirsutum
Gorai.003G061700 Gossypium raimondii
Gorai.006G096900 Gossypium raimondii
GSVIVG01016983001 Vitis vinifera
HanXRQChr02g0032251 Helianthus annuus
HanXRQChr09g0276241 Helianthus annuus
Haze_15847 Corylus avellana
Hma1.2p1_1232F.1_g268910 Hydrangea macrophylla
HPP92_015185 Vanilla planifolia
HPP92_015196 Vanilla planifolia
Hund07600 Selenicereus undatus
Lalb_Chr04g0262971 Lupinus albus
Lalb_Chr22g0351551 Lupinus albus
Lj3g0013010 Lotus japonicus
Lj5C53T3 Lonicera japonica
Lj9C512T10 Lonicera japonica
Lsat_1_v5_gn_1_14160 Lactuca sativa
Lsat_1_v5_gn_1_36740 Lactuca sativa
Lsat_1_v5_gn_4_97461 Lactuca sativa
Lsat_1_v5_gn_6_46660 Lactuca sativa
Manes.04G134200 Manihot esculenta
Manes.11G033651 Manihot esculenta
Mapoly0123s0029 Marchantia polymorpha
MBI04_g36817_MAGBIO Magnolia biondii
MCO01G084 Micromonas commoda
MD09G1202900 Malus domestica
MD17G1184000 Malus domestica
Medtr8g014460 Medicago truncatula
MELO3C024438.2 Cucumis melo
Migut.D00991 Erythranthe guttata
Migut.I00890 Erythranthe guttata
MSTRG.4752 Avicennia marina
Nitab4.5_0006467g0030 Nicotiana tabacum
Nitab4.5_0006902g0030 Nicotiana tabacum
Nn2g11173 Nelumbo nucifera
Nn2g13410 Nelumbo nucifera
Oeu023599.1 Olea europaea
Oeu023601.1 Olea europaea
Oeu026780.1 Olea europaea
Oeu026781.2 Olea europaea
Os08g0157100 Oryza sativa ssp. japonica
Peaxi162Scf00038g01028 Petunia axillaris
PGR102G0015 Punica granatum
Phvul.010G145300 Phaseolus vulgaris
Potri.001G190000 Populus trichocarpa
Potri.003G048900 Populus trichocarpa
Pp3c1_7460 Physcomitrium patens
Pp3c2_32970 Physcomitrium patens
Prupe.1G178600 Prunus persica
Prupe.3G059100 Prunus persica
Psat2g107800 Pisum sativum
PSO339G6278 Papaver somniferum
PSO513G0173 Papaver somniferum
QL05p020046 Quercus lobata
RcHm_v2.0_Chr2g0140531 Rosa chinensis
Rhsim08G0227500 Rhododendron simsii
Sabra01G0151600 Salix brachista
SalBow7G4596 Salvia bowleyana
Sc15g0001880 Simmondsia chinensis
Sed0027607 Sechium edule
SGA_v2.0_scaffold4G02026 Striga asiatica
SHI11095 Sapria himalayana
SMO116G0383 Selaginella moellendorffii
Solyc03g121020.3 Solanum lycopersicum
Sopen03g039850 Solanum pennellii
Sp5g36040 Schrenkiella parvula
TAR369G0235 Trochodendron aralioides
TAR369G0672 Trochodendron aralioides
TAR560G0009 Trochodendron aralioides
TAR623G0538 Trochodendron aralioides
TAR633G2449 Trochodendron aralioides
THA.LOC104819998 Tarenaya hassleriana
Thecc.06G100000 Theobroma cacao
Thhalv10018561m.g Eutrema salsugineum
TPR.G26938 Trifolium pratense
TWI12G0488 Tripterygium wilfordii
TWI75G0851 Tripterygium wilfordii
unitig_52.g17097 Utricularia gibba
vmacro04324 Vaccinium macrocarpon
vmacro18853 Vaccinium macrocarpon
VMungo0331G0134 Vigna mungo
Zm00001eb172540 Zea mays
Zm00001eb415930 Zea mays

User provided reference genes

Program Settings