Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p06550 Brassica napus
A01p06560 Brassica napus
A08p18490 Brassica napus
Aa31LG2G18620 Aethionema arabicum
Actinidia03570 Actinidia chinensis
Actinidia14152 Actinidia chinensis
Actinidia25736 Actinidia chinensis
Ah.09g224730 Amaranthus hybridus
AL7G20310 Arabidopsis lyrata
Aqoxy7G00066 Aquilegia oxysepala
Aqoxy7G00833 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1V29TX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JDP7FN Arachis hypogaea
AT4G31720 Arabidopsis thaliana
ATR0691G047 Amborella trichopoda
AUR62020301 Chenopodium quinoa
AUR62037698 Chenopodium quinoa
BcaB03g12714 Brassica carinata
BcaC01g01070 Brassica carinata
BcaC09g51955 Brassica carinata
BcaC09g51957 Brassica carinata
BcaC09g51961 Brassica carinata
BcaNung05179 Brassica carinata
BolC1t00713H Brassica oleracea
BraA01t00615Z Brassica rapa
BraA08t33811Z Brassica rapa
C01p07220 Brassica napus
C03p87650 Brassica napus
CAN.G566.59 Capsicum annuum
CANSAT25G2804 Cannabis sativa
CARHR239610 Cardamine hirsuta
Carub.0007s0884 Capsella rubella
Ca_06528_v3 Cicer arietinum L.
CBR_g30254 Chara braunii
Cc00_g22050 Coffea canephora
CDE04G1191 Ceratophyllum demersum
Cfa017847 Carpinus fangiana
Ciclev10009813m.g Citrus clementina
CiPaw.15G092700 Carya illinoinensis
ClCG08G013890 Citrullus lanatus
COL.COLO4_19003 Corchorus olitorius
COL.COLO4_21113 Corchorus olitorius
COL.COLO4_27723 Corchorus olitorius
Cre16.g657000 Chlamydomonas reinhardtii
CSS0010222 Camellia sinensis var. sinensis
CSS0022428 Camellia sinensis var. sinensis
CSS0031521 Camellia sinensis var. sinensis
CSS0035568 Camellia sinensis var. sinensis
DCAR_020712 Daucus carota
Dinv03972 Davidia involucrata
Dinv03977 Davidia involucrata
Duzib150G1286 Durio zibethinus
Duzib168G1293 Durio zibethinus
Duzib168G1591 Durio zibethinus
Duzib187G1493 Durio zibethinus
ECA238G2697 Erigeron canadensis
EL10Ac2g02432 Beta vulgaris
EL10Ac5g10893 Beta vulgaris
Eucgr.B03202 Eucalyptus grandis
FAN20G1660 Fragaria x ananassa
FAN24G1669 Fragaria x ananassa
FAN27G2219 Fragaria x ananassa
FvH4_2g11240 Fragaria vesca
Glyma.11G160400 Glycine max
Glyma.18G054400 Glycine max
Gohir.A05G062833 Gossypium hirsutum
Gohir.A05G062900 Gossypium hirsutum
Gohir.A07G034400 Gossypium hirsutum
Gohir.D05G065400 Gossypium hirsutum
Gohir.D07G038000 Gossypium hirsutum
Gorai.001G039800 Gossypium raimondii
Gorai.009G066200 Gossypium raimondii
GSVIVG01023464001 Vitis vinifera
GSVIVG01023467001 Vitis vinifera
HanXRQChr07g0195931 Helianthus annuus
HanXRQChr14g0435251 Helianthus annuus
HanXRQChr14g0453401 Helianthus annuus
Haze_18362 Corylus avellana
Hma1.2p1_0192F.1_g083460 Hydrangea macrophylla
HPP92_000490 Vanilla planifolia
Lalb_Chr08g0233961 Lupinus albus
Lalb_Chr08g0233981 Lupinus albus
Lalb_Chr08g0234011 Lupinus albus
Lalb_Chr10g0091021 Lupinus albus
Lj1g0025268 Lotus japonicus
Lju41A41T35 Lonicera japonica
Lsat_1_v5_gn_6_32161 Lactuca sativa
Manes.03G005700 Manihot esculenta
Mapoly0011s0105 Marchantia polymorpha
MBI15_g18374_MAGBIO Magnolia biondii
MCO01G145 Micromonas commoda
MD08G1049200 Malus domestica
MD15G1045700 Malus domestica
Medtr7g080740 Medicago truncatula
MELO3C011321.2 Cucumis melo
Migut.A00405 Erythranthe guttata
MSTRG.25811 Avicennia marina
MSTRG.9875 Avicennia marina
Nitab4.5_0000668g0030 Nicotiana tabacum
Nitab4.5_0001110g0170 Nicotiana tabacum
Nn3g17630 Nelumbo nucifera
Oeu008768.2 Olea europaea
Os09g0431500 Oryza sativa ssp. japonica
Peaxi162Scf00459g00833 Petunia axillaris
PGR044G1228 Punica granatum
PGSC0003DMG400029278 Solanum tuberosum
Phvul.008G002400 Phaseolus vulgaris
Phvul.008G161300 Phaseolus vulgaris
Phvul.009G222000 Phaseolus vulgaris
Potri.018G013300 Populus trichocarpa
Pp3c6_16040 Physcomitrium patens
PRCOL_00006189 Prasinoderma coloniale
Prupe.1G399400 Prunus persica
Psat0s2083g0280 Pisum sativum
PSO478G2205 Papaver somniferum
PSO782G1729 Papaver somniferum
QL01p029339 Quercus lobata
QL02p017669 Quercus lobata
QL12p013723 Quercus lobata
RcHm_v2.0_Chr2g0161651 Rosa chinensis
RcHm_v2.0_Chr2g0161711 Rosa chinensis
RcHm_v2.0_Chr6g0269591 Rosa chinensis
Sabra18G0017200 Salix brachista
SalBow4G2991 Salvia bowleyana
Sc23g0006270 Simmondsia chinensis
Sed0003546 Sechium edule
Sed0020410 Sechium edule
SEGI_02469 Sequoiadendron giganteum
SEGI_34318 Sequoiadendron giganteum
SGA_v2.0_scaffold193G40677 Striga asiatica
SMO141G0065 Selaginella moellendorffii
SMO356G0735 Selaginella moellendorffii
Solyc12g096470.2 Solanum lycopersicum
Sopen12g032300 Solanum pennellii
Sp7g29520 Schrenkiella parvula
TAR622G0454 Trochodendron aralioides
THA.LOC104803866 Tarenaya hassleriana
THA.LOC104819944 Tarenaya hassleriana
Thecc.09G010700 Theobroma cacao
Thhalv10026546m.g Eutrema salsugineum
TPR.G12644 Trifolium pratense
TPR.G15628 Trifolium pratense
TWI34G0825 Tripterygium wilfordii
TWI63G0754 Tripterygium wilfordii
unitig_93.g30701 Utricularia gibba
vmacro05092 Vaccinium macrocarpon
VMungo1383G2539 Vigna mungo
VMungo1383G3578 Vigna mungo
Zm00001eb313590 Zea mays

User provided reference genes

Program Settings