Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p01480 Brassica napus
A03p65150 Brassica napus
Aa31LG6G14330 Aethionema arabicum
Actinidia32817 Actinidia chinensis
Ah.03g146310 Amaranthus hybridus
Ah.03g146320 Amaranthus hybridus
AL7G13330 Arabidopsis lyrata
Aqoxy6G02774 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.138YHT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E3XCDG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E99DR7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EHFU3U Arachis hypogaea
AT4G37460 Arabidopsis thaliana
ATR0030G036 Amborella trichopoda
ATR0661G243 Amborella trichopoda
Atru.chr3.210 Acer truncatum
AUR62003963 Chenopodium quinoa
AUR62038275 Chenopodium quinoa
BcaNung02055 Brassica carinata
BcaNung02943 Brassica carinata
BcaNung02944 Brassica carinata
BcaNung02945 Brassica carinata
BcaNung03662 Brassica carinata
BcaNung05081 Brassica carinata
BolC1t00159H Brassica oleracea
BolC1t01004H Brassica oleracea
BolC7t46655H Brassica oleracea
BraA01t00142Z Brassica rapa
BraA03t15573Z Brassica rapa
C01p01650 Brassica napus
C07p62400 Brassica napus
CAN.G1075.3 Capsicum annuum
CAN.G1075.4 Capsicum annuum
CAN.G1823.3 Capsicum annuum
CANSAT01G2710 Cannabis sativa
CARHR245860 Cardamine hirsuta
Carub.0007s0282 Capsella rubella
Ca_24712_v3 Cicer arietinum L.
Ca_24727_v3 Cicer arietinum L.
CBR_g36362 Chara braunii
CBR_g36364 Chara braunii
CBR_g36368 Chara braunii
Cc07_g06700 Coffea canephora
Cfa004090 Carpinus fangiana
Ciclev10024760m.g Citrus clementina
CiPaw.01G008100 Carya illinoinensis
CiPaw.01G008200 Carya illinoinensis
ClCG01G017250 Citrullus lanatus
COL.COLO4_11522 Corchorus olitorius
Cpa.g.sc1082.1 Carica papaya
Cpa.g.sc6.59 Carica papaya
Cpa.g.sc6.60 Carica papaya
Cre01.g021450 Chlamydomonas reinhardtii
CsaV3_6G043790 Cucumis sativus L.
CSS0006661 Camellia sinensis var. sinensis
CSS0012173 Camellia sinensis var. sinensis
CSS0020625 Camellia sinensis var. sinensis
CSS0022043 Camellia sinensis var. sinensis
CSS0024631 Camellia sinensis var. sinensis
CSS0024681 Camellia sinensis var. sinensis
CSS0029353 Camellia sinensis var. sinensis
CSS0040429 Camellia sinensis var. sinensis
CSS0042095 Camellia sinensis var. sinensis
CSS0044835 Camellia sinensis var. sinensis
DCAR_010836 Daucus carota
Dinv26891 Davidia involucrata
Dinv30059 Davidia involucrata
Duzib147G1627 Durio zibethinus
Duzib187G0681 Durio zibethinus
Duzib264G0118 Durio zibethinus
ECA238G2979 Erigeron canadensis
EL10Ac6g15665 Beta vulgaris
Eucgr.I00728 Eucalyptus grandis
FAN19G1580 Fragaria x ananassa
FAN23G2362 Fragaria x ananassa
FAN26G1585 Fragaria x ananassa
FAN28G1348 Fragaria x ananassa
FvH4_1g17100 Fragaria vesca
Glyma.01G191100 Glycine max
Glyma.05G102400 Glycine max
Glyma.11G051067 Glycine max
Glyma.11G051133 Glycine max
Glyma.17G164600 Glycine max
Gohir.A11G217900 Gossypium hirsutum
Gohir.D11G205500 Gossypium hirsutum
Gorai.007G220700 Gossypium raimondii
GSVIVG01000163001 Vitis vinifera
HanXRQChr06g0176501 Helianthus annuus
HanXRQChr14g0441841 Helianthus annuus
Haze_15324 Corylus avellana
Hma1.2p1_0017F.1_g012040 Hydrangea macrophylla
Hund16378 Selenicereus undatus
Lalb_Chr05g0226061 Lupinus albus
Lalb_Chr16g0389061 Lupinus albus
Lalb_Chr16g0389071 Lupinus albus
Lj2g0010110 Lotus japonicus
Lj4C159G2 Lonicera japonica
Lj4g0015306 Lotus japonicus
Lsat_1_v5_gn_2_83581 Lactuca sativa
Lsat_1_v5_gn_8_118440 Lactuca sativa
Manes.12G112800 Manihot esculenta
Mapoly0153s0004 Marchantia polymorpha
MBI16_g06665_MAGBIO Magnolia biondii
MD02G1181200 Malus domestica
MD15G1292200 Malus domestica
MD15G1292300 Malus domestica
Medtr5g016190 Medicago truncatula
MELO3C007603.2 Cucumis melo
Migut.H00376 Erythranthe guttata
MSTRG.23699 Avicennia marina
Nitab4.5_0000868g0040 Nicotiana tabacum
Nitab4.5_0001439g0170 Nicotiana tabacum
Nn5g30492 Nelumbo nucifera
Oeu011609.3 Olea europaea
Oeu013276.1 Olea europaea
Os07g0113700 Oryza sativa ssp. japonica
Peaxi162Scf00264g00044 Petunia axillaris
PGR004G2163 Punica granatum
Phvul.002G013866 Phaseolus vulgaris
Phvul.002G013932 Phaseolus vulgaris
Phvul.003G238000 Phaseolus vulgaris
Potri.007G052200 Populus trichocarpa
Pp3c2_36070 Physcomitrium patens
Prupe.6G225100 Prunus persica
Psat2g169880 Pisum sativum
PSO541G4192 Papaver somniferum
PSO675G4881 Papaver somniferum
RcHm_v2.0_Chr1g0315291 Rosa chinensis
RcHm_v2.0_Chr2g0107271 Rosa chinensis
Rhsim08G0096300 Rhododendron simsii
Sabra07G0045800 Salix brachista
Sc16g0004960 Simmondsia chinensis
Sed0025120 Sechium edule
SEGI_23316 Sequoiadendron giganteum
SGA_v2.0_scaffold15G07400 Striga asiatica
Solyc02g092780.3 Solanum lycopersicum
Sopen02g037320 Solanum pennellii
Sp7g35120 Schrenkiella parvula
TAR381G1622 Trochodendron aralioides
TAR625G0217 Trochodendron aralioides
THA.LOC104807611 Tarenaya hassleriana
Thecc.01G067600 Theobroma cacao
Thhalv10024286m.g Eutrema salsugineum
TPR.G20946 Trifolium pratense
TWI09G0336 Tripterygium wilfordii
TWI73G0630 Tripterygium wilfordii
unitig_62.g23418 Utricularia gibba
vmacro17983 Vaccinium macrocarpon
VMungo0251G2147 Vigna mungo
Zm00001eb118220 Zea mays

User provided reference genes

Program Settings