Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p39200 Brassica napus
Aa31LG11G3580 Aethionema arabicum
Aa31LG11G8930 Aethionema arabicum
Actinidia04690 Actinidia chinensis
Actinidia04704 Actinidia chinensis
Actinidia12854 Actinidia chinensis
Actinidia23342 Actinidia chinensis
Actinidia23343 Actinidia chinensis
Actinidia29995 Actinidia chinensis
Actinidia33395 Actinidia chinensis
Actinidia33396 Actinidia chinensis
Ah.11g050790 Amaranthus hybridus
AL8G21200 Arabidopsis lyrata
Aqoxy2G04177 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.57Z9Z9 Arachis hypogaea
AT5G48390 Arabidopsis thaliana
ATR0580G291 Amborella trichopoda
ATR0743G003 Amborella trichopoda
ATR0745G053 Amborella trichopoda
Atru.BG.40.p Acer truncatum
AUR62008065 Chenopodium quinoa
AUR62028642 Chenopodium quinoa
BcaC06g30800 Brassica carinata
BcaC06g30801 Brassica carinata
BolC7t44434H Brassica oleracea
C07p39140 Brassica napus
CAN.G1468.3 Capsicum annuum
CANSAT01G2219 Cannabis sativa
CANSAT01G2868 Cannabis sativa
CARHR183800 Cardamine hirsuta
Carub.0008s0798 Capsella rubella
Ca_08034_v3 Cicer arietinum L.
Cc01_g15850 Coffea canephora
CDE07G1537 Ceratophyllum demersum
Cfa010574 Carpinus fangiana
Ciclev10018269m.g Citrus clementina
CiPaw.13G055800 Carya illinoinensis
ClCG11G010960 Citrullus lanatus
COL.COLO4_34276 Corchorus olitorius
Cpa.g.sc8.38 Carica papaya
Cre10.g427453 Chlamydomonas reinhardtii
CsaV3_2G009520 Cucumis sativus L.
CSS0005222 Camellia sinensis var. sinensis
CSS0012001 Camellia sinensis var. sinensis
CSS0012475 Camellia sinensis var. sinensis
CSS0023073 Camellia sinensis var. sinensis
CSS0036997 Camellia sinensis var. sinensis
CSS0040358 Camellia sinensis var. sinensis
DCAR_004775 Daucus carota
Dinv28790 Davidia involucrata
Duzib133G0915 Durio zibethinus
ECA236G0268 Erigeron canadensis
EL10Ac5g10584 Beta vulgaris
Eucgr.K00106 Eucalyptus grandis
FAN09G3899 Fragaria x ananassa
FAN11G3683 Fragaria x ananassa
FAN14G1126 Fragaria x ananassa
FAN14G1607 Fragaria x ananassa
FAN14G1827 Fragaria x ananassa
FAN14G2335 Fragaria x ananassa
FAN14G2572 Fragaria x ananassa
FAN15G1853 Fragaria x ananassa
FAN15G1962 Fragaria x ananassa
FAN24G1763 Fragaria x ananassa
FAN24G2388 Fragaria x ananassa
FAN24G3373 Fragaria x ananassa
FAN27G2958 Fragaria x ananassa
FvH4_2g09600 Fragaria vesca
FvH4_2g12761 Fragaria vesca
FvH4_2g12781 Fragaria vesca
FvH4_2g17460 Fragaria vesca
FvH4_3g38850 Fragaria vesca
FvH4_4g10312 Fragaria vesca
FvH4_4g15182 Fragaria vesca
FvH4_4g15200 Fragaria vesca
FvH4_6g06080 Fragaria vesca
FvH4_6g27414 Fragaria vesca
FvH4_6g36680 Fragaria vesca
FvH4_6g36881 Fragaria vesca
FvH4_7g08382 Fragaria vesca
FvH4_7g13151 Fragaria vesca
Glyma.09G246350 Glycine max
Glyma.18G246600 Glycine max
Gohir.A11G144000 Gossypium hirsutum
Gohir.D11G150400 Gossypium hirsutum
Gorai.007G161300 Gossypium raimondii
GSVIVG01001528001 Vitis vinifera
HanXRQChr12g0363951 Helianthus annuus
Haze_03508 Corylus avellana
HPP92_001916 Vanilla planifolia
Hund02809 Selenicereus undatus
Lalb_Chr03g0040531 Lupinus albus
Lalb_Chr03g0040541 Lupinus albus
Lj1g0025378 Lotus japonicus
Lj2C1111T4 Lonicera japonica
Lsat_1_v5_gn_8_98501 Lactuca sativa
Manes.13G056300 Manihot esculenta
Mapoly0032s0035 Marchantia polymorpha
MBI10_g23576_MAGBIO Magnolia biondii
MCO15G701 Micromonas commoda
MD05G1153500 Malus domestica
Medtr4g007660 Medicago truncatula
Medtr7g080880 Medicago truncatula
MELO3C008751.2 Cucumis melo
Migut.D00772 Erythranthe guttata
Nitab4.5_0000038g0380 Nicotiana tabacum
Nitab4.5_0008926g0010 Nicotiana tabacum
Nn1g09452 Nelumbo nucifera
Oeu013420.1 Olea europaea
Os01g0890900 Oryza sativa ssp. japonica
Peaxi162Scf02239g00020 Petunia axillaris
PGSC0003DMG400021911 Solanum tuberosum
Phvul.008G050500 Phaseolus vulgaris
Potri.014G175350 Populus trichocarpa
Pp3c19_1150 Physcomitrium patens
Pp3c2_410 Physcomitrium patens
PRCOL_00006857 Prasinoderma coloniale
Prupe.8G186900 Prunus persica
Psat3g100880 Pisum sativum
PSO017G6601 Papaver somniferum
PSO478G1281 Papaver somniferum
QL09p045412 Quercus lobata
RcHm_v2.0_Chr6g0282191 Rosa chinensis
Rhsim13G0055000 Rhododendron simsii
Sabra14G0134100 Salix brachista
SalBow3G1227 Salvia bowleyana
Sc17g0001570 Simmondsia chinensis
Sed0015090 Sechium edule
Sed0024263 Sechium edule
SEGI_29467 Sequoiadendron giganteum
SGA_v2.0_scaffold8G04488 Striga asiatica
SHI10219 Sapria himalayana
SMO201G0221 Selaginella moellendorffii
SMO203G0177 Selaginella moellendorffii
Solyc09g042760.2 Solanum lycopersicum
Sopen09g015810 Solanum pennellii
Sp2g18750 Schrenkiella parvula
TAR365G0304 Trochodendron aralioides
TAR365G0721 Trochodendron aralioides
THA.LOC104819011 Tarenaya hassleriana
Thecc.01G207300 Theobroma cacao
Thhalv10005371m.g Eutrema salsugineum
TPR.G1778 Trifolium pratense
TPR.G35843 Trifolium pratense
TPR.G3742 Trifolium pratense
TWI36G1252 Tripterygium wilfordii
unitig_52.g16794 Utricularia gibba
vmacro02841 Vaccinium macrocarpon
VMungo1383G3652 Vigna mungo
Zm00001eb145140 Zea mays

User provided reference genes

Program Settings