Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p23690 Brassica napus
Aa31LG4G540 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3827 Anthoceros agrestis
Actinidia03540 Actinidia chinensis
Actinidia22602 Actinidia chinensis
Ah.16g107230 Amaranthus hybridus
Aqoxy6G00884 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.LUQS0S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SSY1YH Arachis hypogaea
AT1G20570 Arabidopsis thaliana
AT1G80260 Arabidopsis thaliana
ATR0706G013 Amborella trichopoda
Atru.chr13.612 Acer truncatum
AUR62038364 Chenopodium quinoa
AUR62040965 Chenopodium quinoa
BcaB02g07284 Brassica carinata
BcaB05g23764 Brassica carinata
BcaB05g25284 Brassica carinata
BcaC03g15988 Brassica carinata
BcaC08g45301 Brassica carinata
BolC2t09757H Brassica oleracea
BolC6t38069H Brassica oleracea
BolC6t38070H Brassica oleracea
BraA02t07362Z Brassica rapa
C02p37450 Brassica napus
C06p29060 Brassica napus
CAN.G371.63 Capsicum annuum
CANSAT25G3148 Cannabis sativa
CANSAT35G0575 Cannabis sativa
CARHR074230 Cardamine hirsuta
Carub.0001s2004 Capsella rubella
Carub.0005s2407 Capsella rubella
Ca_15974_v3 Cicer arietinum L.
CBR_g19823 Chara braunii
CBR_g22067 Chara braunii
Cc00_g16150 Coffea canephora
Cc00_g35230 Coffea canephora
Cc00_g35300 Coffea canephora
Cc10_g03830 Coffea canephora
CDE04G0120 Ceratophyllum demersum
CDE04G1747 Ceratophyllum demersum
CDE06G0077 Ceratophyllum demersum
Cfa003370 Carpinus fangiana
Ciclev10000139m.g Citrus clementina
CiPaw.16G049700 Carya illinoinensis
ClCG05G019550 Citrullus lanatus
COL.COLO4_06475 Corchorus olitorius
Cpa.g.sc64.8 Carica papaya
Cre10.g430900 Chlamydomonas reinhardtii
CsaV3_4G034010 Cucumis sativus L.
CSS0007693 Camellia sinensis var. sinensis
CSS0028060 Camellia sinensis var. sinensis
CSS0045461 Camellia sinensis var. sinensis
CSS0048180 Camellia sinensis var. sinensis
DCAR_008784 Daucus carota
Dinv39342 Davidia involucrata
Duzib114G0971 Durio zibethinus
EL10Ac2g03413 Beta vulgaris
Eucgr.F02379 Eucalyptus grandis
FAN15G3424 Fragaria x ananassa
FAN20G1371 Fragaria x ananassa
FAN27G3039 Fragaria x ananassa
FvH4_2g40750 Fragaria vesca
Glyma.04G036340 Glycine max
Glyma.04G036380 Glycine max
Glyma.04G036420 Glycine max
Glyma.04G036460 Glycine max
Glyma.06G036500 Glycine max
Glyma.10G123600 Glycine max
Gohir.A10G194100 Gossypium hirsutum
Gohir.D10G201200 Gossypium hirsutum
Gorai.011G225900 Gossypium raimondii
GSVIVG01009573001 Vitis vinifera
HanXRQChr02g0059171 Helianthus annuus
Haze_17576 Corylus avellana
Haze_25582 Corylus avellana
Haze_25585 Corylus avellana
Hma1.2p1_0260F.1_g104650 Hydrangea macrophylla
Hma1.2p1_0260F.1_g104660 Hydrangea macrophylla
HPP92_010073 Vanilla planifolia
Hund10174 Selenicereus undatus
Lalb_Chr08g0245691 Lupinus albus
Lalb_Chr23g0266901 Lupinus albus
Lj1g0021809 Lotus japonicus
Lj4C49T7 Lonicera japonica
Lsat_1_v5_gn_6_69040 Lactuca sativa
Manes.02G076400 Manihot esculenta
Manes.10G059950 Manihot esculenta
Mapoly0015s0183 Marchantia polymorpha
MBI13_g43601_MAGBIO Magnolia biondii
MBI16_g19924_MAGBIO Magnolia biondii
MCO11G910 Micromonas commoda
MD15G1036000 Malus domestica
Medtr3g101230 Medicago truncatula
MELO3C010311.2 Cucumis melo
MELO3C016650.2 Cucumis melo
MELO3C016726.2 Cucumis melo
Migut.C00614 Erythranthe guttata
MSTRG.25114 Avicennia marina
Nitab4.5_0000068g0320 Nicotiana tabacum
Nitab4.5_0012613g0030 Nicotiana tabacum
Nn6g34572 Nelumbo nucifera
Oeu007037.1 Olea europaea
Oeu055752.1 Olea europaea
Os02g0523300 Oryza sativa ssp. japonica
Os12g0606100 Oryza sativa ssp. japonica
Peaxi162Scf01092g00128 Petunia axillaris
PGR031G2121 Punica granatum
PGSC0003DMG400008031 Solanum tuberosum
Phvul.009G062500 Phaseolus vulgaris
Potri.014G184701 Populus trichocarpa
Potri.014G184801 Populus trichocarpa
Potri.016G000100 Populus trichocarpa
Pp3c13_8820 Physcomitrium patens
Pp3c26_7850 Physcomitrium patens
Prupe.1G389900 Prunus persica
Prupe.1G390100 Prunus persica
Psat5g044920 Pisum sativum
PSO063G1848 Papaver somniferum
PSO339G5893 Papaver somniferum
QL02p006188 Quercus lobata
RcHm_v2.0_Chr6g0299841 Rosa chinensis
Rhsim13G0049200 Rhododendron simsii
Sabra16G0008200 Salix brachista
SalBow7G3268 Salvia bowleyana
Sc18g0002370 Simmondsia chinensis
Sed0020372 Sechium edule
SEGI_09331 Sequoiadendron giganteum
SEGI_10220 Sequoiadendron giganteum
SEGI_10713 Sequoiadendron giganteum
SEGI_19344 Sequoiadendron giganteum
SGA_v2.0_scaffold156G37306 Striga asiatica
SGA_v2.0_scaffold5008G54579 Striga asiatica
SHI13748 Sapria himalayana
Solyc04g079390.3 Solanum lycopersicum
Sopen04g033000 Solanum pennellii
Sp5g35550 Schrenkiella parvula
TAR381G0370 Trochodendron aralioides
TAR625G1292 Trochodendron aralioides
THA.LOC104813523 Tarenaya hassleriana
Thecc.10G126500 Theobroma cacao
Thhalv10018067m.g Eutrema salsugineum
TPR.G26027 Trifolium pratense
TWI36G1022 Tripterygium wilfordii
unitig_0.g724 Utricularia gibba
unitig_0.g725 Utricularia gibba
unitig_0.g726 Utricularia gibba
vmacro02786 Vaccinium macrocarpon
VMungo1309G1417 Vigna mungo
Zm00001eb327280 Zea mays

User provided reference genes

Program Settings