Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p32440 Brassica napus
A10p24090 Brassica napus
A10p26090 Brassica napus
Aa31LG5G10780 Aethionema arabicum
Actinidia05982 Actinidia chinensis
Ah.03g137000 Amaranthus hybridus
AL3G10510 Arabidopsis lyrata
AL6G25200 Arabidopsis lyrata
Aqoxy4G03095 Aquilegia oxysepala
Aqoxy5G00914 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.53NGA2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6CI6DX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BJ3QP1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FEY4ZS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NF5K9F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XQCE19 Arachis hypogaea
AT3G01640 Arabidopsis thaliana
AT5G14470 Arabidopsis thaliana
ATR0681G379 Amborella trichopoda
ATR0827G043 Amborella trichopoda
Atru.chr6.2429 Acer truncatum
Atru.chr6.2430 Acer truncatum
AUR62008872 Chenopodium quinoa
AUR62031837 Chenopodium quinoa
BcaB08g36982 Brassica carinata
BcaB08g36995 Brassica carinata
BcaB08g36997 Brassica carinata
BcaC01g04530 Brassica carinata
BcaC04g19032 Brassica carinata
BcaNung06761 Brassica carinata
BolC3t16218H Brassica oleracea
BolC9t59108H Brassica oleracea
BolC9t59344H Brassica oleracea
BraA03t12414Z Brassica rapa
BraA10t44472Z Brassica rapa
C03p39500 Brassica napus
C09p62710 Brassica napus
CAN.G1057.11 Capsicum annuum
CAN.G473.20 Capsicum annuum
CANSAT64G1903 Cannabis sativa
CARHR075280 Cardamine hirsuta
CARHR198840 Cardamine hirsuta
Carub.0003s0042 Capsella rubella
Carub.0006s1265 Capsella rubella
Ca_04143_v3 Cicer arietinum L.
CBR_g3618 Chara braunii
Cc09_g04510 Coffea canephora
CDE07G0337 Ceratophyllum demersum
CDE07G1161 Ceratophyllum demersum
Cfa007339 Carpinus fangiana
Ciclev10015593m.g Citrus clementina
CiPaw.03G045500 Carya illinoinensis
CiPaw.04G029600 Carya illinoinensis
ClCG09G019380 Citrullus lanatus
COL.COLO4_29172 Corchorus olitorius
Cre02.g107600 Chlamydomonas reinhardtii
CsaV3_5G027030 Cucumis sativus L.
DCAR_021732 Daucus carota
Dinv25726 Davidia involucrata
Dinv33427 Davidia involucrata
Duzib147G0164 Durio zibethinus
Duzib264G0638 Durio zibethinus
ECA246G1179 Erigeron canadensis
EL10Ac6g14097 Beta vulgaris
Eucgr.I01731 Eucalyptus grandis
FAN02G0047 Fragaria x ananassa
FAN05G4087 Fragaria x ananassa
FAN09G2944 Fragaria x ananassa
FAN14G2766 Fragaria x ananassa
FvH4_6g51800 Fragaria vesca
Glyma.05G002500 Glycine max
Glyma.19G002700 Glycine max
Gohir.A09G030100 Gossypium hirsutum
Gohir.D09G029800 Gossypium hirsutum
Gorai.006G034800 Gossypium raimondii
GSVIVG01032385001 Vitis vinifera
HanXRQChr17g0548641 Helianthus annuus
HanXRQChr17g0548651 Helianthus annuus
Haze_14758 Corylus avellana
HPP92_015407 Vanilla planifolia
HPP92_026990 Vanilla planifolia
Hund23289 Selenicereus undatus
Lalb_Chr06g0176621 Lupinus albus
Lj2g0024676 Lotus japonicus
Lju41A43T26 Lonicera japonica
Lsat_1_v5_gn_0_18301 Lactuca sativa
Manes.15G151900 Manihot esculenta
Mapoly0023s0058 Marchantia polymorpha
MBI05_g01825_MAGBIO Magnolia biondii
MBI05_g22077_MAGBIO Magnolia biondii
MCO09G795 Micromonas commoda
MD09G1023000 Malus domestica
MD17G1022300 Malus domestica
MD17G1022500 Malus domestica
Medtr6g004430 Medicago truncatula
MELO3C021592.2 Cucumis melo
Migut.K01411 Erythranthe guttata
MSTRG.3138 Avicennia marina
MSTRG.3285 Avicennia marina
Nitab4.5_0000040g0670 Nicotiana tabacum
Nitab4.5_0001550g0030 Nicotiana tabacum
Nitab4.5_0001860g0030 Nicotiana tabacum
Nitab4.5_0006683g0060 Nicotiana tabacum
Nn8g40033 Nelumbo nucifera
Oeu018151.1 Olea europaea
Oeu033729.3 Olea europaea
Os11g0217300 Oryza sativa ssp. japonica
Peaxi162Scf00080g01316 Petunia axillaris
Peaxi162Scf00129g01650 Petunia axillaris
Peaxi162Scf03028g00012 Petunia axillaris
PGR142G3088 Punica granatum
PGSC0003DMG400012608 Solanum tuberosum
Phvul.004G004700 Phaseolus vulgaris
Potri.001G343400 Populus trichocarpa
Pp3c22_9380 Physcomitrium patens
PRCOL_00005101 Prasinoderma coloniale
Prupe.3G293800 Prunus persica
Psat1g053480 Pisum sativum
PSO384G0906 Papaver somniferum
PSO699G0033 Papaver somniferum
QL02p074005 Quercus lobata
RcHm_v2.0_Chr2g0173281 Rosa chinensis
Rhsim10G0014700 Rhododendron simsii
Sabra16G0222700 Salix brachista
SalBow7G3047 Salvia bowleyana
Sc03g0007290 Simmondsia chinensis
Sed0020215 Sechium edule
Sed0027438 Sechium edule
SGA_v2.0_scaffold30G12409 Striga asiatica
SGA_v2.0_scaffold47G17516 Striga asiatica
SHI00354 Sapria himalayana
SHI25478 Sapria himalayana
SMO145G0043 Selaginella moellendorffii
Solyc02g093440.4 Solanum lycopersicum
Sopen02g038030 Solanum pennellii
Sopen02g038230 Solanum pennellii
Sp3g00410 Schrenkiella parvula
Sp6g29550 Schrenkiella parvula
TAR633G2310 Trochodendron aralioides
THA.LOC104821096 Tarenaya hassleriana
Thecc.04G019500 Theobroma cacao
Thhalv10013912m.g Eutrema salsugineum
Thhalv10020980m.g Eutrema salsugineum
TPR.G31950 Trifolium pratense
TWI12G0632 Tripterygium wilfordii
TWI56G0780 Tripterygium wilfordii
unitig_0.g1597 Utricularia gibba
vmacro05876 Vaccinium macrocarpon
VMungo0464G1388 Vigna mungo
Zm00001eb025800 Zea mays

User provided reference genes

Program Settings