Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p27910 Brassica napus
A06p47740 Brassica napus
Aa31LG5G3520 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2200 Anthoceros agrestis
Actinidia05471 Actinidia chinensis
Ah.13g071540 Amaranthus hybridus
Ah.13g071550 Amaranthus hybridus
AL1G13830 Arabidopsis lyrata
AL37U10050 Arabidopsis lyrata
AL8G16560 Arabidopsis lyrata
Aqoxy2G03527 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8JLR9N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9S1KBE Arachis hypogaea
AT1G04230 Arabidopsis thaliana
AT1G70335 Arabidopsis thaliana
AT5G43720 Arabidopsis thaliana
ATR0665G449 Amborella trichopoda
AUR62040390 Chenopodium quinoa
AUR62041210 Chenopodium quinoa
BcaC03g16589 Brassica carinata
BcaC06g31682 Brassica carinata
BcaC06g34634 Brassica carinata
BcaC06g34635 Brassica carinata
BolC2t10451H Brassica oleracea
BolC7t43157H Brassica oleracea
BraA02t07829Z Brassica rapa
BraA06t27642Z Brassica rapa
C02p44080 Brassica napus
C07p26280 Brassica napus
CAN.G626.13 Capsicum annuum
CANSAT78G1520 Cannabis sativa
CARHR003560 Cardamine hirsuta
CARHR179900 Cardamine hirsuta
Carub.0001s0342 Capsella rubella
Carub.0008s0491 Capsella rubella
Ca_09877_v3 Cicer arietinum L.
CBR_g525 Chara braunii
Cc03_g04640 Coffea canephora
CDE04G3353 Ceratophyllum demersum
CDE06G2453 Ceratophyllum demersum
CDE07G0872 Ceratophyllum demersum
CDE07G2030 Ceratophyllum demersum
Ciclev10005381m.g Citrus clementina
CiPaw.02G117800 Carya illinoinensis
Cpa.g.c45152 Carica papaya
Cpa.g.sc58.23 Carica papaya
Cre10.g452600 Chlamydomonas reinhardtii
CsaV3_3G012680 Cucumis sativus L.
CSS0009777 Camellia sinensis var. sinensis
CSS0025455 Camellia sinensis var. sinensis
DCAR_030710 Daucus carota
Dinv44614 Davidia involucrata
Duzib052G0554 Durio zibethinus
Duzib151G0562 Durio zibethinus
ECA233G3913 Erigeron canadensis
EL10Ac4g07493 Beta vulgaris
Eucgr.H03172 Eucalyptus grandis
FAN11G1852 Fragaria x ananassa
FAN16G0422 Fragaria x ananassa
FAN16G1149 Fragaria x ananassa
FAN21G0973 Fragaria x ananassa
FAN25G1200 Fragaria x ananassa
FAN25G2316 Fragaria x ananassa
FvH4_3g24470 Fragaria vesca
Glyma.10G179800 Glycine max
Glyma.20G210600 Glycine max
Gohir.A09G057300 Gossypium hirsutum
Gohir.A10G114500 Gossypium hirsutum
Gohir.D03G068600 Gossypium hirsutum
Gohir.D08G197400 Gossypium hirsutum
Gohir.D09G056500 Gossypium hirsutum
Gohir.D10G098700 Gossypium hirsutum
Gohir.D10G152000 Gossypium hirsutum
Gorai.003G091900 Gossypium raimondii
Gorai.006G070100 Gossypium raimondii
Gorai.007G212000 Gossypium raimondii
Gorai.011G170500 Gossypium raimondii
GSVIVG01018096001 Vitis vinifera
GSVIVG01034858001 Vitis vinifera
HanXRQChr12g0381181 Helianthus annuus
Haze_11271 Corylus avellana
HPP92_014140 Vanilla planifolia
Hund17874 Selenicereus undatus
Lalb_Chr06g0168981 Lupinus albus
Lalb_Chr21g0311951 Lupinus albus
Lj3A719T118 Lonicera japonica
Lj5g0012164 Lotus japonicus
Lsat_1_v5_gn_5_67500 Lactuca sativa
Manes.03G170000 Manihot esculenta
Manes.15G035800 Manihot esculenta
Mapoly0010s0154 Marchantia polymorpha
MBI11_g38514_MAGBIO Magnolia biondii
MCO11G351 Micromonas commoda
MD13G1204100 Malus domestica
MD16G1206200 Malus domestica
Medtr1g076290 Medicago truncatula
MELO3C006479.2 Cucumis melo
Migut.G00417 Erythranthe guttata
Migut.N00232 Erythranthe guttata
MSTRG.21888 Avicennia marina
Nitab4.5_0000525g0090 Nicotiana tabacum
Nitab4.5_0004203g0050 Nicotiana tabacum
Nn1g02556 Nelumbo nucifera
Oeu032612.1 Olea europaea
Os03g0797700 Oryza sativa ssp. japonica
Peaxi162Scf01416g00120 Petunia axillaris
PGR004G2231 Punica granatum
PGSC0003DMG400006092 Solanum tuberosum
Phvul.003G138434 Phaseolus vulgaris
Potri.008G160800 Populus trichocarpa
Potri.010G078500 Populus trichocarpa
Pp3c2_37690 Physcomitrium patens
Prupe.1G027200 Prunus persica
Psat6g114920 Pisum sativum
PSO210G2862 Papaver somniferum
PSO210G5612 Papaver somniferum
PSO238G0009 Papaver somniferum
PSO832G0934 Papaver somniferum
QL06p015098 Quercus lobata
RcHm_v2.0_Chr5g0043971 Rosa chinensis
Rhsim02G0032600 Rhododendron simsii
Sabra08G0122700 Salix brachista
SalBow3G1711 Salvia bowleyana
Sc13g0004930 Simmondsia chinensis
Sed0018032 Sechium edule
Sed0027984 Sechium edule
SEGI_31281 Sequoiadendron giganteum
SGA_v2.0_scaffold101G29779 Striga asiatica
SHI00581 Sapria himalayana
SMO347G0406 Selaginella moellendorffii
SMO358G0388 Selaginella moellendorffii
SMO358G0458 Selaginella moellendorffii
SMO361G0546 Selaginella moellendorffii
Solyc09g083270.4 Solanum lycopersicum
Sopen09g032190 Solanum pennellii
Sp2g08510 Schrenkiella parvula
TAR365G1176 Trochodendron aralioides
TAR636G2191 Trochodendron aralioides
THA.LOC104815979 Tarenaya hassleriana
THA.LOC104826068 Tarenaya hassleriana
Thecc.04G244000 Theobroma cacao
Thhalv10003245m.g Eutrema salsugineum
TWI09G0491 Tripterygium wilfordii
TWI73G0814 Tripterygium wilfordii
unitig_0.g131 Utricularia gibba
vmacro15402 Vaccinium macrocarpon
VMungo0720G1087 Vigna mungo
Zm00001eb034960 Zea mays
Zm00001eb060930 Zea mays
Zm00001eb060940 Zea mays
Zm00001eb212900 Zea mays

User provided reference genes

Program Settings