Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p33610 Brassica napus
A04p04990 Brassica napus
A04p05000 Brassica napus
A05p43040 Brassica napus
Aa31LG5G14890 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2413 Anthoceros agrestis
Actinidia34758 Actinidia chinensis
Ah.06g191810 Amaranthus hybridus
AL3G14410 Arabidopsis lyrata
Aqoxy5G00161 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.A8VMLZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VXFY9N Arachis hypogaea
AT3G04460 Arabidopsis thaliana
ATR0736G049 Amborella trichopoda
Atru.chr2.1001 Acer truncatum
AUR62004828 Chenopodium quinoa
AUR62040914 Chenopodium quinoa
BcaB04g19333 Brassica carinata
BcaC01g04376 Brassica carinata
BcaC05g29943 Brassica carinata
BcaC05g30197 Brassica carinata
BcaC06g35909 Brassica carinata
BcaC09g50711 Brassica carinata
BolC1t02169H Brassica oleracea
BolC3t16350H Brassica oleracea
BolC5t34933H Brassica oleracea
BolC6t38557H Brassica oleracea
BolC7t41419H Brassica oleracea
BraA03t12536Z Brassica rapa
BraA04t16133Z Brassica rapa
BraA05t23048Z Brassica rapa
C01p22380 Brassica napus
C03p40810 Brassica napus
C05p62800 Brassica napus
C07p09790 Brassica napus
CAN.G1465.15 Capsicum annuum
CANSAT54G0581 Cannabis sativa
CANSAT80G2333 Cannabis sativa
CANSAT80G2786 Cannabis sativa
CARHR078590 Cardamine hirsuta
CARHR078600 Cardamine hirsuta
Carub.0003s0362 Capsella rubella
Ca_11390_v3 Cicer arietinum L.
CBR_g51833 Chara braunii
Cc02_g08720 Coffea canephora
Cc04_g06470 Coffea canephora
Cc05_g01300 Coffea canephora
Cc06_g01540 Coffea canephora
Cc06_g01550 Coffea canephora
Cc06_g14670 Coffea canephora
CDE05G2618 Ceratophyllum demersum
Ciclev10024089m.g Citrus clementina
CiPaw.08G118600 Carya illinoinensis
ClCG11G010490 Citrullus lanatus
COL.COLO4_15501 Corchorus olitorius
Cpa.g.sc306.4 Carica papaya
Cre06.g263602 Chlamydomonas reinhardtii
CsaV3_2G009880 Cucumis sativus L.
CSS0003371 Camellia sinensis var. sinensis
DCAR_023087 Daucus carota
Dinv06242 Davidia involucrata
Duzib106G1539 Durio zibethinus
ECA233G1223 Erigeron canadensis
EL10Ac4g08990 Beta vulgaris
Eucgr.B02154 Eucalyptus grandis
FAN05G0331 Fragaria x ananassa
FAN05G0601 Fragaria x ananassa
FAN05G3121 Fragaria x ananassa
FAN09G4068 Fragaria x ananassa
FAN14G2287 Fragaria x ananassa
FAN14G4075 Fragaria x ananassa
FAN18G0756 Fragaria x ananassa
FvH4_2g09480 Fragaria vesca
FvH4_3g30700 Fragaria vesca
FvH4_4g13630 Fragaria vesca
FvH4_6g01740 Fragaria vesca
Glyma.03G250100 Glycine max
Glyma.19G247700 Glycine max
Gohir.A11G246300 Gossypium hirsutum
Gohir.D11G256500 Gossypium hirsutum
Gorai.007G274800 Gossypium raimondii
GSVIVG01023441001 Vitis vinifera
HanXRQChr08g0216941 Helianthus annuus
Haze_04413 Corylus avellana
Hma1.2p1_1336F.1_g276500 Hydrangea macrophylla
HPP92_008536 Vanilla planifolia
Hund22166 Selenicereus undatus
Lalb_Chr04g0253351 Lupinus albus
Lj1g0026343 Lotus japonicus
Lj2A44T81 Lonicera japonica
Lsat_1_v5_gn_8_25181 Lactuca sativa
Manes.08G140200 Manihot esculenta
Mapoly0097s0077 Marchantia polymorpha
MBI07_g12932_MAGBIO Magnolia biondii
MCO09G554 Micromonas commoda
MD00G1148800 Malus domestica
MD04G1231200 Malus domestica
MD08G1214200 Malus domestica
MD08G1214500 Malus domestica
MD12G1249500 Malus domestica
Medtr1g116380 Medicago truncatula
MELO3C008694.2 Cucumis melo
Migut.F01538 Erythranthe guttata
MSTRG.8229 Avicennia marina
Nitab4.5_0000914g0090 Nicotiana tabacum
Nitab4.5_0003965g0030 Nicotiana tabacum
Nn1g02931 Nelumbo nucifera
Oeu040904.1 Olea europaea
Oeu050631.1 Olea europaea
Os10g0467200 Oryza sativa ssp. japonica
Peaxi162Scf00015g02911 Petunia axillaris
PGR142G4366 Punica granatum
PGSC0003DMG400023503 Solanum tuberosum
Phvul.006G104800 Phaseolus vulgaris
Potri.013G047800 Populus trichocarpa
Potri.019G020000 Populus trichocarpa
Pp3c17_6400 Physcomitrium patens
PRCOL_00005674 Prasinoderma coloniale
Prupe.6G350900 Prunus persica
Psat0s1997g0040 Pisum sativum
Psat3g057720 Pisum sativum
Psat3g113200 Pisum sativum
Psat6g176520 Pisum sativum
PSO674G0057 Papaver somniferum
QL03p029772 Quercus lobata
RcHm_v2.0_Chr3g0449481 Rosa chinensis
Rhsim09G0133700 Rhododendron simsii
RhsimUnG0045000 Rhododendron simsii
Sabra19G0032200 Salix brachista
SalBow6G5574 Salvia bowleyana
Sc20g0000690 Simmondsia chinensis
Sed0011238 Sechium edule
SEGI_05516 Sequoiadendron giganteum
SEGI_06182 Sequoiadendron giganteum
SEGI_08581 Sequoiadendron giganteum
SGA_v2.0_scaffold426G51496 Striga asiatica
SHI31416 Sapria himalayana
SMO367G0182 Selaginella moellendorffii
Solyc05g054950.2 Solanum lycopersicum
Sopen05g033410 Solanum pennellii
Sp3g03310 Schrenkiella parvula
TAR362G0172 Trochodendron aralioides
THA.LOC104820770 Tarenaya hassleriana
Thecc.05G269900 Theobroma cacao
Thhalv10020878m.g Eutrema salsugineum
TPR.G10414 Trifolium pratense
TWI36G0265 Tripterygium wilfordii
unitig_899.g15065 Utricularia gibba
vmacro10377 Vaccinium macrocarpon
VMungo0540G0495 Vigna mungo
Zm00001eb046420 Zea mays

User provided reference genes

Program Settings