Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p27120 Brassica napus
A04p13500 Brassica napus
Aa31LG9G1150 Aethionema arabicum
Actinidia35771 Actinidia chinensis
AL7G49360 Arabidopsis lyrata
Aqoxy5G03783 Aquilegia oxysepala
AT5G40470 Arabidopsis thaliana
ATR0589G064 Amborella trichopoda
ATR0686G244 Amborella trichopoda
ATR0762G040 Amborella trichopoda
Atru.chr6.2392 Acer truncatum
Atru.chr6.2393 Acer truncatum
BcaB06g27513 Brassica carinata
BcaB07g32983 Brassica carinata
BolC4t26328H Brassica oleracea
BraA04t17009Z Brassica rapa
C04p47280 Brassica napus
CAN.G473.11 Capsicum annuum
CANSAT64G1143 Cannabis sativa
CARHR261520 Cardamine hirsuta
Carub.0007s3511 Capsella rubella
Ca_23007_v3 Cicer arietinum L.
Cc00_g26710 Coffea canephora
Cc07_g01680 Coffea canephora
CDE08G0710 Ceratophyllum demersum
Cfa007369 Carpinus fangiana
Ciclev10015079m.g Citrus clementina
CiPaw.03G043700 Carya illinoinensis
CiPaw.04G028400 Carya illinoinensis
ClCG10G013890 Citrullus lanatus
COL.COLO4_29115 Corchorus olitorius
Cpa.g.sc130.82 Carica papaya
Cre12.g524900 Chlamydomonas reinhardtii
CsaV3_3G042800 Cucumis sativus L.
CSS0032397 Camellia sinensis var. sinensis
CSS0033026 Camellia sinensis var. sinensis
CSS0034270 Camellia sinensis var. sinensis
CSS0039002 Camellia sinensis var. sinensis
DCAR_021722 Daucus carota
Dinv35106 Davidia involucrata
Duzib147G1217 Durio zibethinus
Eucgr.H01852 Eucalyptus grandis
Eucgr.J02242 Eucalyptus grandis
Eucgr.L00043 Eucalyptus grandis
FAN02G2556 Fragaria x ananassa
FAN02G3838 Fragaria x ananassa
FAN05G1656 Fragaria x ananassa
FAN05G3297 Fragaria x ananassa
FAN05G3698 Fragaria x ananassa
FAN09G0037 Fragaria x ananassa
FAN14G0631 Fragaria x ananassa
FAN14G1702 Fragaria x ananassa
FAN27G1866 Fragaria x ananassa
FvH4_6g51200 Fragaria vesca
Glyma.16G071200 Glycine max
Glyma.19G068600 Glycine max
Gohir.A05G355800 Gossypium hirsutum
Gohir.A07G223200 Gossypium hirsutum
Gohir.D04G057500 Gossypium hirsutum
Gohir.D07G229900 Gossypium hirsutum
Gorai.001G265000 Gossypium raimondii
Gorai.012G064200 Gossypium raimondii
GSVIVG01032408001 Vitis vinifera
HanXRQChr07g0188231 Helianthus annuus
HanXRQChr15g0475301 Helianthus annuus
HanXRQChr17g0548491 Helianthus annuus
Haze_14739 Corylus avellana
Hma1.2p1_2120F.1_g314420 Hydrangea macrophylla
HPP92_009906 Vanilla planifolia
Lalb_Chr14g0362771 Lupinus albus
Lalb_Chr24g0402861 Lupinus albus
Lj1g0007322 Lotus japonicus
Lj7C599T13 Lonicera japonica
Lju41C42T3 Lonicera japonica
Lsat_1_v5_gn_0_47681 Lactuca sativa
Manes.15G150700 Manihot esculenta
MD09G1027100 Malus domestica
MD17G1027100 Malus domestica
Medtr7g033720 Medicago truncatula
MELO3C026581.2 Cucumis melo
Migut.H00077 Erythranthe guttata
MSTRG.24039 Avicennia marina
Nitab4.5_0002468g0010 Nicotiana tabacum
Nitab4.5_0003318g0120 Nicotiana tabacum
Nitab4.5_0007441g0020 Nicotiana tabacum
Nitab4.5_0007441g0040 Nicotiana tabacum
Nn1g05920 Nelumbo nucifera
Nn3g16731 Nelumbo nucifera
Nn3g16736 Nelumbo nucifera
Oeu018139.1 Olea europaea
Oeu054623.1 Olea europaea
Peaxi162Scf00129g00168 Petunia axillaris
Peaxi162Scf00129g01633 Petunia axillaris
Peaxi162Scf00129g01652 Petunia axillaris
PGR083G0754 Punica granatum
PGSC0003DMG400012633 Solanum tuberosum
Phvul.008G154600 Phaseolus vulgaris
Potri.017G069800 Populus trichocarpa
Prupe.3G291600 Prunus persica
Psat3g166880 Pisum sativum
PSO063G1038 Papaver somniferum
PSO832G2649 Papaver somniferum
QL02p074723 Quercus lobata
RcHm_v2.0_Chr2g0172801 Rosa chinensis
Rhsim08G0048900 Rhododendron simsii
Rhsim08G0049200 Rhododendron simsii
Rhsim08G0049300 Rhododendron simsii
Rhsim08G0049400 Rhododendron simsii
Rhsim08G0049500 Rhododendron simsii
Rhsim08G0049600 Rhododendron simsii
Rhsim08G0049900 Rhododendron simsii
Rhsim08G0050000 Rhododendron simsii
Rhsim08G0050100 Rhododendron simsii
Rhsim08G0050200 Rhododendron simsii
Rhsim08G0050300 Rhododendron simsii
Rhsim08G0050400 Rhododendron simsii
Rhsim08G0050500 Rhododendron simsii
Rhsim08G0050600 Rhododendron simsii
Sabra17G0062100 Salix brachista
SalBow1G4779 Salvia bowleyana
SalBow2G2412 Salvia bowleyana
Sc16g0004350 Simmondsia chinensis
Sed0007166 Sechium edule
SGA_v2.0_scaffold18G08277 Striga asiatica
SMO298G0062 Selaginella moellendorffii
Solyc02g086440.4 Solanum lycopersicum
Sopen02g031150 Solanum pennellii
Sp7g01440 Schrenkiella parvula
TAR314G0001 Trochodendron aralioides
TAR314G0006 Trochodendron aralioides
TAR371G0152 Trochodendron aralioides
TAR371G0343 Trochodendron aralioides
TAR371G0422 Trochodendron aralioides
TAR371G1027 Trochodendron aralioides
TAR374G1232 Trochodendron aralioides
TAR622G0125 Trochodendron aralioides
TAR629G3424 Trochodendron aralioides
TAR633G0371 Trochodendron aralioides
THA.LOC104825322 Tarenaya hassleriana
Thecc.04G017200 Theobroma cacao
Thhalv10028043m.g Eutrema salsugineum
TPR.G1076 Trifolium pratense
TWI12G0316 Tripterygium wilfordii
unitig_899.g14805 Utricularia gibba
vmacro18283 Vaccinium macrocarpon
vmacro18284 Vaccinium macrocarpon
vmacro18285 Vaccinium macrocarpon
vmacro23390 Vaccinium macrocarpon
vmacro23391 Vaccinium macrocarpon
vmacro23392 Vaccinium macrocarpon
VMungo1383G0924 Vigna mungo
Zm00001eb246170 Zea mays

User provided reference genes

Program Settings