Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p34260 Brassica napus
A09p07010 Brassica napus
Aa31LG11G2760 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5917 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_340.305 Anthoceros agrestis
Actinidia04336 Actinidia chinensis
Ah.08g211980 Amaranthus hybridus
AL6G34560 Arabidopsis lyrata
Aqoxy5G04369 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7S4D4S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GVRL8L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NQ58Z6 Arachis hypogaea
AT5G23300 Arabidopsis thaliana
ATR0618G304 Amborella trichopoda
Atru.chr11.1102 Acer truncatum
Atru.chr11.1106 Acer truncatum
AUR62002708 Chenopodium quinoa
AUR62002710 Chenopodium quinoa
AUR62030167 Chenopodium quinoa
BcaB04g19879 Brassica carinata
BcaC02g11010 Brassica carinata
BcaC04g23488 Brassica carinata
BolC7t44949H Brassica oleracea
BolC9t53698H Brassica oleracea
BraA06t26358Z Brassica rapa
BraA09t36349Z Brassica rapa
C04p22220 Brassica napus
C07p44260 Brassica napus
C08p27210 Brassica napus
C09p07820 Brassica napus
CAN.G282.44 Capsicum annuum
CARHR190240 Cardamine hirsuta
Carub.0006s2107 Capsella rubella
Ca_11257_v3 Cicer arietinum L.
Ca_29057_v3 Cicer arietinum L.
CBR_g49488 Chara braunii
CBR_g53542 Chara braunii
Cc11_g00600 Coffea canephora
CDE05G3051 Ceratophyllum demersum
CDE05G3274 Ceratophyllum demersum
CDE05G3312 Ceratophyllum demersum
Cfa008769 Carpinus fangiana
Cfa021670 Carpinus fangiana
Ciclev10031476m.g Citrus clementina
CiPaw.05G171200 Carya illinoinensis
ClCG01G008090 Citrullus lanatus
COL.COLO4_33098 Corchorus olitorius
Cpa.g.c30355 Carica papaya
Cre03.g199423 Chlamydomonas reinhardtii
CsaV3_1G039280 Cucumis sativus L.
CsaV3_5G020740 Cucumis sativus L.
CSS0023232 Camellia sinensis var. sinensis
DCAR_002602 Daucus carota
DCAR_026881 Daucus carota
Dinv17644 Davidia involucrata
Dinv25387 Davidia involucrata
Duzib132G1043 Durio zibethinus
Duzib248G0882 Durio zibethinus
ECA234G2132 Erigeron canadensis
ECA248G2791 Erigeron canadensis
EL10Ac7g17331 Beta vulgaris
Eucgr.I02621 Eucalyptus grandis
FAN11G2678 Fragaria x ananassa
FAN16G1105 Fragaria x ananassa
FAN21G1781 Fragaria x ananassa
FAN25G2081 Fragaria x ananassa
FvH4_3g07800 Fragaria vesca
Glyma.10G286200 Glycine max
Glyma.20G103100 Glycine max
Gohir.A03G166000 Gossypium hirsutum
Gohir.D02G189300 Gossypium hirsutum
Gorai.005G212000 Gossypium raimondii
GSVIVG01026142001 Vitis vinifera
HanXRQChr01g0018951 Helianthus annuus
HanXRQChr01g0018971 Helianthus annuus
Haze_11781 Corylus avellana
Haze_27018 Corylus avellana
HPP92_014771 Vanilla planifolia
Hund08594 Selenicereus undatus
Lalb_Chr02g0143631 Lupinus albus
Lj3A847T44 Lonicera japonica
Lj5g0006106 Lotus japonicus
Lsat_1_v5_gn_1_81640 Lactuca sativa
Lsat_1_v5_gn_1_81660 Lactuca sativa
Manes.15G107800 Manihot esculenta
Mapoly0020s0155 Marchantia polymorpha
MBI03_g13828_MAGBIO Magnolia biondii
MCO08G060 Micromonas commoda
MD05G1301200 Malus domestica
MD10G1280100 Malus domestica
Medtr1g114530 Medicago truncatula
MELO3C005067.2 Cucumis melo
MELO3C015352.2 Cucumis melo
Migut.N00083 Erythranthe guttata
Nitab4.5_0000069g0140 Nicotiana tabacum
Nitab4.5_0006274g0020 Nicotiana tabacum
Nn3g18601 Nelumbo nucifera
Oeu063362.5 Olea europaea
Os04g0676300 Oryza sativa ssp. japonica
Peaxi162Scf00021g02316 Petunia axillaris
PGR142G1834 Punica granatum
PGR142G2467 Punica granatum
PGR142G2596 Punica granatum
PGSC0003DMG401016396 Solanum tuberosum
Phvul.007G014700 Phaseolus vulgaris
Potri.005G089700 Populus trichocarpa
Potri.007G074101 Populus trichocarpa
Potri.007G074201 Populus trichocarpa
Pp3c15_6200 Physcomitrium patens
Pp3c9_12870 Physcomitrium patens
Prupe.4G061300 Prunus persica
Prupe.6G003700 Prunus persica
Psat6g233800 Pisum sativum
PSO063G7087 Papaver somniferum
PSO339G2837 Papaver somniferum
PSO339G5988 Papaver somniferum
PSO782G3529 Papaver somniferum
PSO782G4799 Papaver somniferum
QL03p045749 Quercus lobata
QL06p048547 Quercus lobata
RcHm_v2.0_Chr5g0010781 Rosa chinensis
RcHm_v2.0_Chr5g0050031 Rosa chinensis
RcHm_v2.0_Chr5g0050041 Rosa chinensis
RcHm_v2.0_Chr5g0064321 Rosa chinensis
Rhsim09G0069200 Rhododendron simsii
Sabra05G0073800 Salix brachista
SalBow5G5328 Salvia bowleyana
Sc06g0006850 Simmondsia chinensis
Sed0016006 Sechium edule
SEGI_23530 Sequoiadendron giganteum
SEGI_39125 Sequoiadendron giganteum
SGA_v2.0_scaffold428G51528 Striga asiatica
SGA_v2.0_scaffold91G28011 Striga asiatica
SHI28437 Sapria himalayana
SMO351G0256 Selaginella moellendorffii
Solyc01g008290.3 Solanum lycopersicum
Sopen01g003810 Solanum pennellii
Sp2g23850 Schrenkiella parvula
TAR629G3247 Trochodendron aralioides
THA.LOC104800685 Tarenaya hassleriana
Thecc.02G155600 Theobroma cacao
Thecc.02G156000 Theobroma cacao
Thecc.02G156100 Theobroma cacao
Thhalv10004171m.g Eutrema salsugineum
TPR.G4052 Trifolium pratense
TWI53G0925 Tripterygium wilfordii
TWI74G1525 Tripterygium wilfordii
unitig_749.g13388 Utricularia gibba
vmacro15993 Vaccinium macrocarpon
vmacro15994 Vaccinium macrocarpon
VMungo0720G1992 Vigna mungo
Zm00001eb433680 Zea mays

User provided reference genes

Program Settings