Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p30630 Brassica napus
A03p67220 Brassica napus
A09p25510 Brassica napus
Aa31LG2G9080 Aethionema arabicum
Aa31LG9G9220 Aethionema arabicum
AL2G14350 Arabidopsis lyrata
AL6G48820 Arabidopsis lyrata
Aqoxy4G02005 Aquilegia oxysepala
AT1G61760 Arabidopsis thaliana
AT4G05220 Arabidopsis thaliana
ATR0794G132 Amborella trichopoda
Atru.chr10.2139 Acer truncatum
Atru.chr10.2140 Acer truncatum
BcaB01g01894 Brassica carinata
BcaB04g20371 Brassica carinata
BcaC02g10538 Brassica carinata
BcaC04g21386 Brassica carinata
BcaC06g31861 Brassica carinata
BolC1t03854H Brassica oleracea
BolC4t24315H Brassica oleracea
BolC9t56087H Brassica oleracea
BraA01t02752Z Brassica rapa
BraA01t03194Z Brassica rapa
BraA09t38126Z Brassica rapa
C01p39040 Brassica napus
C04p27710 Brassica napus
C09p32420 Brassica napus
CAN.G404.72 Capsicum annuum
CAN.G569.47 Capsicum annuum
CANSAT56G2353 Cannabis sativa
CARHR050580 Cardamine hirsuta
CARHR050590 Cardamine hirsuta
CARHR252340 Cardamine hirsuta
Carub.0002s0331 Capsella rubella
Carub.0006s3316 Capsella rubella
Ca_10986_v3 Cicer arietinum L.
Cc00_g17330 Coffea canephora
CDE01G0650 Ceratophyllum demersum
Cfa021639 Carpinus fangiana
Ciclev10016725m.g Citrus clementina
Ciclev10016780m.g Citrus clementina
Ciclev10017613m.g Citrus clementina
CiPaw.09G086600 Carya illinoinensis
CiPaw.10G067800 Carya illinoinensis
ClCG03G005010 Citrullus lanatus
COL.COLO4_31720 Corchorus olitorius
Cpa.g.sc81.26 Carica papaya
CsaV3_1G011090 Cucumis sativus L.
CSS0029430 Camellia sinensis var. sinensis
DCAR_028154 Daucus carota
Dinv18890 Davidia involucrata
Dinv20009 Davidia involucrata
Duzib160G0710 Durio zibethinus
Duzib192G0146 Durio zibethinus
Duzib235G0333 Durio zibethinus
EL10Ac8g19904 Beta vulgaris
Eucgr.D00819 Eucalyptus grandis
FvH4_3g02710 Fragaria vesca
Glyma.10G252500 Glycine max
Glyma.20G140900 Glycine max
Gohir.A06G144900 Gossypium hirsutum
Gohir.A06G208200 Gossypium hirsutum
Gohir.A06G208300 Gossypium hirsutum
Gohir.A10G015600 Gossypium hirsutum
Gohir.D06G151400 Gossypium hirsutum
Gohir.D06G212800 Gossypium hirsutum
Gohir.D06G212900 Gossypium hirsutum
Gohir.D10G015600 Gossypium hirsutum
Gorai.010G176500 Gossypium raimondii
Gorai.010G253200 Gossypium raimondii
Gorai.010G253300 Gossypium raimondii
Gorai.011G017200 Gossypium raimondii
GSVIVG01012622001 Vitis vinifera
HanXRQChr15g0473381 Helianthus annuus
HanXRQChr16g0516361 Helianthus annuus
Haze_06727 Corylus avellana
Haze_06730 Corylus avellana
Hma1.2p1_0091F.1_g046130 Hydrangea macrophylla
Hma1.2p1_0729F.1_g209590 Hydrangea macrophylla
HPP92_010082 Vanilla planifolia
HPP92_010091 Vanilla planifolia
Lalb_Chr02g0144571 Lupinus albus
Lalb_Chr21g0307861 Lupinus albus
Lj1P1224T18 Lonicera japonica
Lj5g0012012 Lotus japonicus
Lsat_1_v5_gn_4_57701 Lactuca sativa
Lsat_1_v5_gn_7_16961 Lactuca sativa
Manes.16G013100 Manihot esculenta
Manes.17G029200 Manihot esculenta
MBI02_g10993_MAGBIO Magnolia biondii
MBI18_g06812_MAGBIO Magnolia biondii
MD05G1340700 Malus domestica
MD10G1314200 Malus domestica
Medtr1g105570 Medicago truncatula
MELO3C002486.2 Cucumis melo
Migut.H01550 Erythranthe guttata
MSTRG.14650 Avicennia marina
Nitab4.5_0000900g0080 Nicotiana tabacum
Nitab4.5_0001686g0030 Nicotiana tabacum
Nitab4.5_0004428g0010 Nicotiana tabacum
Nitab4.5_0012745g0020 Nicotiana tabacum
Nn1g03649 Nelumbo nucifera
Nn1g07009 Nelumbo nucifera
Oeu002712.1 Olea europaea
Oeu026854.1 Olea europaea
Oeu030987.2 Olea europaea
Os04g0628300 Oryza sativa ssp. japonica
Os07g0531500 Oryza sativa ssp. japonica
Peaxi162Scf00082g00164 Petunia axillaris
Peaxi162Scf00781g00043 Petunia axillaris
PGR004G0091 Punica granatum
PGSC0003DMG400002082 Solanum tuberosum
PGSC0003DMG400005073 Solanum tuberosum
Phvul.007G051700 Phaseolus vulgaris
Potri.004G023300 Populus trichocarpa
Potri.011G027400 Populus trichocarpa
Prupe.4G026800 Prunus persica
Psat6g210120 Pisum sativum
PSO541G6526 Papaver somniferum
PSO675G2425 Papaver somniferum
QL05p075308 Quercus lobata
RcHm_v2.0_Chr5g0004071 Rosa chinensis
Rhsim02G0112500 Rhododendron simsii
Sabra04G0012800 Salix brachista
Sabra11G0017300 Salix brachista
Sabra11G0020900 Salix brachista
SalBow1G1219 Salvia bowleyana
SalBow8G3899 Salvia bowleyana
Sc05g0008850 Simmondsia chinensis
Sed0000521 Sechium edule
Sed0023853 Sechium edule
SGA_v2.0_scaffold89G27443 Striga asiatica
Solyc02g080100.1 Solanum lycopersicum
Sopen02g024820 Solanum pennellii
Sp2g02800 Schrenkiella parvula
Sp6g03770 Schrenkiella parvula
TAR626G0768 Trochodendron aralioides
TAR629G1637 Trochodendron aralioides
THA.LOC104806980 Tarenaya hassleriana
THA.LOC104818895 Tarenaya hassleriana
Thecc.06G213500 Theobroma cacao
Thhalv10024123m.g Eutrema salsugineum
Thhalv10028945m.g Eutrema salsugineum
TPR.G5531 Trifolium pratense
TWI38G2287 Tripterygium wilfordii
TWI63G0675 Tripterygium wilfordii
unitig_26.g9397 Utricularia gibba
unitig_62.g23516 Utricularia gibba
VMungo0720G0776 Vigna mungo
Zm00001eb065400 Zea mays
Zm00001eb106290 Zea mays
Zm00001eb323160 Zea mays

User provided reference genes

Program Settings