Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p08620 Brassica napus
A10p14720 Brassica napus
Aa31LG3G13170 Aethionema arabicum
Actinidia29956 Actinidia chinensis
Ah.05g168230 Amaranthus hybridus
Ah.16g108570 Amaranthus hybridus
AL7G27120 Arabidopsis lyrata
AL8G33260 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.90PU0B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9B8HPN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AP25S4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P39ID1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P9UE85 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XNR1AK Arachis hypogaea
AT4G25890 Arabidopsis thaliana
AT5G57290 Arabidopsis thaliana
ATR0626G247 Amborella trichopoda
Atru.chr12.1305 Acer truncatum
AUR62026626 Chenopodium quinoa
AUR62034880 Chenopodium quinoa
BcaB05g22334 Brassica carinata
BcaB08g36089 Brassica carinata
BcaC03g14166 Brassica carinata
BcaC04g19981 Brassica carinata
BolC2t07563H Brassica oleracea
BolC3t13948H Brassica oleracea
BolC9t57762H Brassica oleracea
BraA02t05931Z Brassica rapa
BraA10t43555Z Brassica rapa
C02p14390 Brassica napus
C03p15060 Brassica napus
C09p49130 Brassica napus
CAN.G86.2 Capsicum annuum
CANSAT11G1984 Cannabis sativa
CARHR233360 Cardamine hirsuta
CARHR271090 Cardamine hirsuta
Carub.0007s1506 Capsella rubella
Carub.0008s1780 Capsella rubella
Ca_17781_v3 Cicer arietinum L.
Cc06_g22110 Coffea canephora
CDE05G2165 Ceratophyllum demersum
Cfa013427 Carpinus fangiana
Ciclev10002863m.g Citrus clementina
CiPaw.08G034100 Carya illinoinensis
ClCG11G011930 Citrullus lanatus
COL.COLO4_25466 Corchorus olitorius
Cpa.g.sc95.32 Carica papaya
CsaV3_2G008580 Cucumis sativus L.
CSS0022850 Camellia sinensis var. sinensis
DCAR_003035 Daucus carota
Dinv25400 Davidia involucrata
Dinv25401 Davidia involucrata
Dinv26446 Davidia involucrata
Duzib150G0904 Durio zibethinus
Duzib168G1583 Durio zibethinus
Duzib170G0267 Durio zibethinus
ECA247G3496 Erigeron canadensis
Eucgr.A01410 Eucalyptus grandis
Eucgr.C02261 Eucalyptus grandis
Eucgr.C02263 Eucalyptus grandis
FAN07G2001 Fragaria x ananassa
FAN12G2445 Fragaria x ananassa
FAN17G2475 Fragaria x ananassa
FAN22G0664 Fragaria x ananassa
FvH4_4g07630 Fragaria vesca
Glyma.05G174300 Glycine max
Glyma.08G131500 Glycine max
Gohir.A05G003400 Gossypium hirsutum
Gohir.D05G003800 Gossypium hirsutum
Gorai.009G003400 Gossypium raimondii
GSVIVG01010910001 Vitis vinifera
HanXRQChr10g0297881 Helianthus annuus
Hund26676 Selenicereus undatus
Lalb_Chr07g0185421 Lupinus albus
Lalb_Chr13g0295841 Lupinus albus
Lj4g0022898 Lotus japonicus
Lj6g0003516 Lotus japonicus
Lsat_1_v5_gn_9_31040 Lactuca sativa
Manes.06G021300 Manihot esculenta
Mapoly0006s0174 Marchantia polymorpha
MBI13_g31550_MAGBIO Magnolia biondii
MD13G1245200 Malus domestica
MD16G1253100 Malus domestica
Medtr8g089790 Medicago truncatula
MELO3C003999.2 Cucumis melo
Migut.J00819 Erythranthe guttata
Migut.L01900 Erythranthe guttata
MSTRG.19386 Avicennia marina
MSTRG.26532 Avicennia marina
Nitab4.5_0000074g0010 Nicotiana tabacum
Nitab4.5_0012849g0010 Nicotiana tabacum
Nn2g12744 Nelumbo nucifera
Oeu000974.1 Olea europaea
Oeu044701.1 Olea europaea
Oeu044703.1 Olea europaea
Oeu064534.1 Olea europaea
Os01g0231700 Oryza sativa ssp. japonica
Os06g0701400 Oryza sativa ssp. japonica
Peaxi162Scf00324g00719 Petunia axillaris
PGR044G2628 Punica granatum
PGR109G0004 Punica granatum
PGR142G3975 Punica granatum
PGSC0003DMG400008513 Solanum tuberosum
Phvul.002G259300 Phaseolus vulgaris
Potri.003G010200 Populus trichocarpa
Potri.009G032600 Populus trichocarpa
Pp3c19_7230 Physcomitrium patens
Pp3c21_16160 Physcomitrium patens
Pp3c22_2920 Physcomitrium patens
Prupe.1G079500 Prunus persica
Psat7g058720 Pisum sativum
PSO423G0052 Papaver somniferum
PSO423G0276 Papaver somniferum
PSO596G0050 Papaver somniferum
PSO596G0067 Papaver somniferum
QL11p004841 Quercus lobata
RcHm_v2.0_Chr1g0341131 Rosa chinensis
RcHm_v2.0_Chr4g0400241 Rosa chinensis
Rhsim01G0120500 Rhododendron simsii
Sabra03G0005200 Salix brachista
Sabra09G0023200 Salix brachista
SalBow5G3614 Salvia bowleyana
Sc26g0002890 Simmondsia chinensis
Sed0001835 Sechium edule
Sed0005886 Sechium edule
SEGI_03932 Sequoiadendron giganteum
SGA_v2.0_scaffold21G09635 Striga asiatica
SGA_v2.0_scaffold41G15867 Striga asiatica
SGA_v2.0_scaffold46G17340 Striga asiatica
SMO172G0233 Selaginella moellendorffii
Solyc07g009330.4 Solanum lycopersicum
Sopen07g005080 Solanum pennellii
Sp6g19020 Schrenkiella parvula
Sp7g23910 Schrenkiella parvula
TAR625G0051 Trochodendron aralioides
TAR636G3485 Trochodendron aralioides
THA.LOC104811780 Tarenaya hassleriana
THA.LOC104813509 Tarenaya hassleriana
Thecc.01G270900 Theobroma cacao
Thecc.01G294400 Theobroma cacao
Thecc.09G180300 Theobroma cacao
Thhalv10015037m.g Eutrema salsugineum
Thhalv10026301m.g Eutrema salsugineum
TPR.G6298 Trifolium pratense
TWI18G0069 Tripterygium wilfordii
TWI38G1790 Tripterygium wilfordii
TWI38G2070 Tripterygium wilfordii
unitig_899.g15189 Utricularia gibba
vmacro20836 Vaccinium macrocarpon
VMungo0251G0447 Vigna mungo
Zm00001eb226990 Zea mays
Zm00001eb272850 Zea mays

User provided reference genes

Program Settings