Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p41460 Brassica napus
A09p07230 Brassica napus
Aa31LG11G2200 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.780 Anthoceros agrestis
Actinidia04835 Actinidia chinensis
Actinidia21317 Actinidia chinensis
Actinidia25779 Actinidia chinensis
Actinidia25782 Actinidia chinensis
Ah.11g047930 Amaranthus hybridus
AL8G37800 Arabidopsis lyrata
Aqoxy3G03618 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8FG0EB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EPA5QP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PN7U9Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WE96GU Arachis hypogaea
AT5G61150 Arabidopsis thaliana
ATR0064G044 Amborella trichopoda
Atru.chr9.403 Acer truncatum
AUR62008513 Chenopodium quinoa
AUR62021577 Chenopodium quinoa
BcaC04g23462 Brassica carinata
BolC2t12188H Brassica oleracea
BolC9t53722H Brassica oleracea
BraA09t36373Z Brassica rapa
C02p61390 Brassica napus
C09p08080 Brassica napus
CAN.G479.17 Capsicum annuum
CARHR274840 Cardamine hirsuta
Carub.0008s2182 Capsella rubella
Ca_02963_v3 Cicer arietinum L.
Ca_02964_v3 Cicer arietinum L.
CBR_g54910 Chara braunii
Cc04_g13220 Coffea canephora
CDE04G3432 Ceratophyllum demersum
Ciclev10019267m.g Citrus clementina
CiPaw.11G051800 Carya illinoinensis
ClCG04G011890 Citrullus lanatus
COL.COLO4_37593 Corchorus olitorius
Cpa.g.c34487 Carica papaya
Cpa.g.c41089 Carica papaya
Cpa.g.sc94.29 Carica papaya
Cre16.g694204 Chlamydomonas reinhardtii
CSS0002450 Camellia sinensis var. sinensis
DCAR_023142 Daucus carota
Dinv10521 Davidia involucrata
Dinv17400 Davidia involucrata
Duzib205G0813 Durio zibethinus
ECA246G0121 Erigeron canadensis
EL10Ac5g11115 Beta vulgaris
Eucgr.K02520 Eucalyptus grandis
FAN08G2012 Fragaria x ananassa
FAN13G1538 Fragaria x ananassa
FAN18G1977 Fragaria x ananassa
FvH4_5g14030 Fragaria vesca
Glyma.04G163400 Glycine max
Glyma.06G202100 Glycine max
Gohir.A12G181900 Gossypium hirsutum
Gohir.D01G045700 Gossypium hirsutum
Gohir.D07G141700 Gossypium hirsutum
Gohir.D12G082100 Gossypium hirsutum
Gohir.D12G082302 Gossypium hirsutum
Gohir.D12G184700 Gossypium hirsutum
Gohir.D13G091100 Gossypium hirsutum
Gorai.008G198100 Gossypium raimondii
Gorai.011G032300 Gossypium raimondii
GSVIVG01007883001 Vitis vinifera
GSVIVG01007906001 Vitis vinifera
HanXRQChr05g0157271 Helianthus annuus
Haze_07703 Corylus avellana
HPP92_018601 Vanilla planifolia
Hund02595 Selenicereus undatus
Lalb_Chr07g0184901 Lupinus albus
Lalb_Chr07g0184911 Lupinus albus
Lalb_Chr13g0296121 Lupinus albus
Lj1g0002650 Lotus japonicus
Lj5A104T41 Lonicera japonica
Lsat_1_v5_gn_1_13541 Lactuca sativa
Lsat_1_v5_gn_3_57821 Lactuca sativa
Lsat_1_v5_gn_5_23161 Lactuca sativa
Manes.06G085750 Manihot esculenta
Manes.14G084900 Manihot esculenta
Mapoly0001s0516 Marchantia polymorpha
MBI05_g05675_MAGBIO Magnolia biondii
MBI05_g39010_MAGBIO Magnolia biondii
MBI16_g41829_MAGBIO Magnolia biondii
MCO04G392 Micromonas commoda
MD06G1200900 Malus domestica
MD06G1201000 Malus domestica
MD06G1201100 Malus domestica
MD06G1201400 Malus domestica
MD07G1015800 Malus domestica
MD14G1210500 Malus domestica
Medtr3g024360 Medicago truncatula
Medtr3g024380 Medicago truncatula
MELO3C002019.2 Cucumis melo
Migut.D01694 Erythranthe guttata
Migut.I00327 Erythranthe guttata
MSTRG.11357 Avicennia marina
MSTRG.22981 Avicennia marina
MSTRG.22984 Avicennia marina
Nitab4.5_0001410g0060 Nicotiana tabacum
Nitab4.5_0001485g0220 Nicotiana tabacum
Nn030s41597 Nelumbo nucifera
Nn4g23407 Nelumbo nucifera
Oeu001010.1 Olea europaea
Oeu001821.1 Olea europaea
Oeu008253.1 Olea europaea
Oeu022173.1 Olea europaea
Oeu047994.1 Olea europaea
Os03g0756500 Oryza sativa ssp. japonica
Os07g0109600 Oryza sativa ssp. japonica
Os12g0579000 Oryza sativa ssp. japonica
Peaxi162Scf00201g00230 Petunia axillaris
Peaxi162Scf00201g00231 Petunia axillaris
Peaxi162Scf00201g10021 Petunia axillaris
PGR044G2204 Punica granatum
Phvul.009G192800 Phaseolus vulgaris
Potri.012G065600 Populus trichocarpa
Pp3c14_2440 Physcomitrium patens
Prupe.5G203800 Prunus persica
Psat0s569g0080 Pisum sativum
PSO017G5800 Papaver somniferum
PSO478G1197 Papaver somniferum
QL10p019188 Quercus lobata
RcHm_v2.0_Chr7g0182791 Rosa chinensis
RhsimUnG0229200 Rhododendron simsii
Sabra12G0046900 Salix brachista
SalBow5G1942 Salvia bowleyana
SalBow5G5272 Salvia bowleyana
Sc04g0004870 Simmondsia chinensis
Sed0023482 Sechium edule
Sed0026784 Sechium edule
SEGI_03099 Sequoiadendron giganteum
SEGI_21680 Sequoiadendron giganteum
SGA_v2.0_scaffold114G31924 Striga asiatica
SGA_v2.0_scaffold313G48307 Striga asiatica
SMO301G0010 Selaginella moellendorffii
Solyc03g115240.4 Solanum lycopersicum
Sopen03g034280 Solanum pennellii
Sp2g24400 Schrenkiella parvula
TAR374G0643 Trochodendron aralioides
TAR622G0763 Trochodendron aralioides
THA.LOC104818342 Tarenaya hassleriana
Thecc.03G099900 Theobroma cacao
Thhalv10003808m.g Eutrema salsugineum
TPR.G11937 Trifolium pratense
TWI81G0494 Tripterygium wilfordii
unitig_749.g13436 Utricularia gibba
vmacro16504 Vaccinium macrocarpon
VMungo1309G1059 Vigna mungo
Zm00001eb118140 Zea mays
Zm00001eb298660 Zea mays

User provided reference genes

Program Settings