Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p30750 Brassica napus
Aa31LG10G8540 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2211 Anthoceros agrestis
Actinidia00514 Actinidia chinensis
Actinidia09194 Actinidia chinensis
Actinidia09195 Actinidia chinensis
Actinidia09196 Actinidia chinensis
Actinidia09197 Actinidia chinensis
Actinidia09206 Actinidia chinensis
Ah.02g115100 Amaranthus hybridus
AL1G30120 Arabidopsis lyrata
Aqoxy1G00017 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.21VBB5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BVJW9Q Arachis hypogaea
AT1G17760 Arabidopsis thaliana
ATR0307G027 Amborella trichopoda
Atru.chr1.2074 Acer truncatum
AUR62036481 Chenopodium quinoa
AUR62037093 Chenopodium quinoa
BcaC02g08049 Brassica carinata
BcaC04g19678 Brassica carinata
BcaC07g38890 Brassica carinata
BolC3t17347H Brassica oleracea
BolC4t27414H Brassica oleracea
BolC8t49451H Brassica oleracea
BolC9t58149H Brassica oleracea
BraA08t35006Z Brassica rapa
C03p50580 Brassica napus
C04p59020 Brassica napus
C08p18170 Brassica napus
C09p52830 Brassica napus
CAN.G606.10 Capsicum annuum
CAN.G606.11 Capsicum annuum
CAN.G606.9 Capsicum annuum
CARHR018370 Cardamine hirsuta
Carub.0001s1749 Capsella rubella
Ca_04451_v3 Cicer arietinum L.
CBR_g19801 Chara braunii
Cc02_g18400 Coffea canephora
CDE09G0881 Ceratophyllum demersum
Cfa018260 Carpinus fangiana
Ciclev10011123m.g Citrus clementina
CiPaw.16G007200 Carya illinoinensis
ClCG04G004810 Citrullus lanatus
ClCG04G004820 Citrullus lanatus
COL.COLO4_04346 Corchorus olitorius
Cpa.g.sc111.45 Carica papaya
Cpa.g.sc111.48 Carica papaya
Cpa.g.sc111.49 Carica papaya
Cre12.g506050 Chlamydomonas reinhardtii
CsaV3_4G031660 Cucumis sativus L.
CSS0026504 Camellia sinensis var. sinensis
DCAR_022066 Daucus carota
Dinv04542 Davidia involucrata
Duzib106G1219 Durio zibethinus
ECA240G1163 Erigeron canadensis
EL10Ac5g11622 Beta vulgaris
Eucgr.K03557 Eucalyptus grandis
FAN04G3268 Fragaria x ananassa
FAN05G0989 Fragaria x ananassa
FAN08G1445 Fragaria x ananassa
FAN09G3976 Fragaria x ananassa
FAN13G1880 Fragaria x ananassa
FAN14G1986 Fragaria x ananassa
FAN18G4560 Fragaria x ananassa
FvH4_5g27050 Fragaria vesca
FvH4_6g34990 Fragaria vesca
Glyma.05G086850 Glycine max
Glyma.19G064500 Glycine max
Gohir.A02G097201 Gossypium hirsutum
Gohir.A06G170700 Gossypium hirsutum
Gohir.D01G069250 Gossypium hirsutum
Gohir.D06G178500 Gossypium hirsutum
Gorai.N006700 Gossypium raimondii
GSVIVG01032296001 Vitis vinifera
HanXRQChr03g0072161 Helianthus annuus
Haze_17831 Corylus avellana
Haze_17837 Corylus avellana
HPP92_012441 Vanilla planifolia
HPP92_028179 Vanilla planifolia
HPP92_028180 Vanilla planifolia
Hund15153 Selenicereus undatus
Hund15156 Selenicereus undatus
Lalb_Chr06g0174221 Lupinus albus
Lj2g0018835 Lotus japonicus
Lj5C205G23 Lonicera japonica
Lsat_1_v5_gn_9_108940 Lactuca sativa
Manes.14G160925 Manihot esculenta
Mapoly0001s0525 Marchantia polymorpha
MBI19_g06604_MAGBIO Magnolia biondii
MCO07G203 Micromonas commoda
MD09G1000100 Malus domestica
Medtr6g026900 Medicago truncatula
MELO3C008873.2 Cucumis melo
Migut.N01206 Erythranthe guttata
MSTRG.5372 Avicennia marina
Nitab4.5_0000876g0200 Nicotiana tabacum
Nitab4.5_0009440g0010 Nicotiana tabacum
Nitab4.5_0016907g0010 Nicotiana tabacum
Nn4g25146 Nelumbo nucifera
Oeu013671.1 Olea europaea
Os12g0571900 Oryza sativa ssp. japonica
Peaxi162Scf00003g01938 Petunia axillaris
PGR044G1247 Punica granatum
Phvul.004G051000 Phaseolus vulgaris
Potri.003G106200 Populus trichocarpa
Pp3c10_14410 Physcomitrium patens
Pp3c3_19050 Physcomitrium patens
PRCOL_00007255 Prasinoderma coloniale
Prupe.1G353000 Prunus persica
Psat1g085480 Pisum sativum
Psat2g043000 Pisum sativum
PSO210G4088 Papaver somniferum
PSO210G5098 Papaver somniferum
PSO210G7430 Papaver somniferum
PSO339G3970 Papaver somniferum
PSO384G3007 Papaver somniferum
QL02p036387 Quercus lobata
QL02p036407 Quercus lobata
QL02p036851 Quercus lobata
QL02p036870 Quercus lobata
RcHm_v2.0_Chr2g0146051 Rosa chinensis
RcHm_v2.0_Chr7g0218051 Rosa chinensis
Rhsim11G0174100 Rhododendron simsii
Sabra03G0073000 Salix brachista
SalBow3G0991 Salvia bowleyana
Sc16g0003300 Simmondsia chinensis
Sed0000937 Sechium edule
Sed0006977 Sechium edule
Sed0008285 Sechium edule
Sed0024483 Sechium edule
SEGI_06326 Sequoiadendron giganteum
SEGI_25586 Sequoiadendron giganteum
SGA_v2.0_scaffold32G13290 Striga asiatica
SGA_v2.0_scaffold55G19835 Striga asiatica
SGA_v2.0_scaffold753G53552 Striga asiatica
SMO356G0171 Selaginella moellendorffii
Solyc10g050540.2 Solanum lycopersicum
Sopen10g022210 Solanum pennellii
Sp1g15840 Schrenkiella parvula
TAR636G1158 Trochodendron aralioides
THA.LOC104812205 Tarenaya hassleriana
Thecc.10G126600 Theobroma cacao
Thhalv10006915m.g Eutrema salsugineum
Thhalv10029084m.g Eutrema salsugineum
TPR.G33000 Trifolium pratense
TPR.G39924 Trifolium pratense
TWI18G0824 Tripterygium wilfordii
unitig_8.g3575 Utricularia gibba
vmacro02132 Vaccinium macrocarpon
vmacro10447 Vaccinium macrocarpon
VMungo0464G0703 Vigna mungo
Zm00001eb287160 Zea mays

User provided reference genes

Program Settings