Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p20290 Brassica napus
Aa31csc271G10 Aethionema arabicum
Aa31sc348G30 Aethionema arabicum
Aa31sc60G10 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.447 Anthoceros agrestis
Actinidia06832 Actinidia chinensis
Actinidia39978 Actinidia chinensis
Ah.01g017460 Amaranthus hybridus
Ah.06g195430 Amaranthus hybridus
AL5G26580 Arabidopsis lyrata
Aqoxy2G01476 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.537LAH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.66TKXZ Arachis hypogaea
AT3G47390 Arabidopsis thaliana
ATR0661G474 Amborella trichopoda
ATR0804G049 Amborella trichopoda
ATR0804G063 Amborella trichopoda
Atru.BG.270.p Acer truncatum
AUR62000303 Chenopodium quinoa
AUR62006648 Chenopodium quinoa
BcaB01g00932 Brassica carinata
BcaC01g01832 Brassica carinata
BolC3t19438H Brassica oleracea
BraA06t25110Z Brassica rapa
C03p71470 Brassica napus
CAN.G1807.2 Capsicum annuum
CANSAT54G2477 Cannabis sativa
CARHR156030 Cardamine hirsuta
Carub.0005s1348 Capsella rubella
Ca_07992_v3 Cicer arietinum L.
CBR_g21226 Chara braunii
Cc09_g03720 Coffea canephora
CDE05G2962 Ceratophyllum demersum
CDE05G3244 Ceratophyllum demersum
Ciclev10011346m.g Citrus clementina
CiPaw.07G081200 Carya illinoinensis
ClCG03G010600 Citrullus lanatus
COL.COLO4_38035 Corchorus olitorius
Cpa.g.sc2508.1 Carica papaya
Cpa.g.sc39.15 Carica papaya
Cpa.g.sc39.16 Carica papaya
Cre17.g728950 Chlamydomonas reinhardtii
CsaV3_1G044470 Cucumis sativus L.
CSS0025571 Camellia sinensis var. sinensis
CSS0046891 Camellia sinensis var. sinensis
DCAR_020684 Daucus carota
Dinv29093 Davidia involucrata
Duzib106G1853 Durio zibethinus
ECA236G3464 Erigeron canadensis
EL10Ac4g09992 Beta vulgaris
Eucgr.C00113 Eucalyptus grandis
FAN09G1869 Fragaria x ananassa
FAN14G5139 Fragaria x ananassa
FvH4_6g00440 Fragaria vesca
Glyma.09G249800 Glycine max
Glyma.18G242600 Glycine max
Gohir.A08G226100 Gossypium hirsutum
Gohir.D08G246500 Gossypium hirsutum
Gorai.004G263000 Gossypium raimondii
GSVIVG01019077001 Vitis vinifera
HanXRQChr06g0173981 Helianthus annuus
HanXRQChr06g0174041 Helianthus annuus
HanXRQChr11g0327871 Helianthus annuus
HanXRQChr17g0538711 Helianthus annuus
Haze_04568 Corylus avellana
Hma1.2p1_0199F.1_g085710 Hydrangea macrophylla
Hma1.2p1_0609F.1_g188420 Hydrangea macrophylla
Hma1.2p1_0609F.1_g188430 Hydrangea macrophylla
HPP92_008120 Vanilla planifolia
Hund01197 Selenicereus undatus
Hund01211 Selenicereus undatus
Hund01346 Selenicereus undatus
Hund01450 Selenicereus undatus
Hund07352 Selenicereus undatus
Hund12586 Selenicereus undatus
Hund20226 Selenicereus undatus
Hund21904 Selenicereus undatus
Hund24180 Selenicereus undatus
Hund26061 Selenicereus undatus
Lalb_Chr03g0038671 Lupinus albus
Lj1g0000623 Lotus japonicus
Lj2C731T11 Lonicera japonica
Lsat_1_v5_gn_3_24661 Lactuca sativa
Lsat_1_v5_gn_7_32541 Lactuca sativa
Lsat_1_v5_gn_8_109000 Lactuca sativa
Manes.12G005100 Manihot esculenta
Mapoly0151s0033 Marchantia polymorpha
MBI11_g05799_MAGBIO Magnolia biondii
MCO11G683 Micromonas commoda
MD04G1245400 Malus domestica
MD13G1061000 Malus domestica
Medtr7g080117 Medicago truncatula
MELO3C010048.2 Cucumis melo
MELO3C010050.2 Cucumis melo
Migut.F02116 Erythranthe guttata
Nitab4.5_0000083g0070 Nicotiana tabacum
Nitab4.5_0001435g0010 Nicotiana tabacum
Nn1g09737 Nelumbo nucifera
Nn1g09776 Nelumbo nucifera
Oeu009739.1 Olea europaea
Os02g0473000 Oryza sativa ssp. japonica
Peaxi162Scf00048g00311 Petunia axillaris
PGR083G2717 Punica granatum
PGR092G0005 Punica granatum
PGR119G2005 Punica granatum
PGSC0003DMG400010518 Solanum tuberosum
Phvul.008G053900 Phaseolus vulgaris
Potri.019G054000 Populus trichocarpa
Pp3c15_7710 Physcomitrium patens
Pp3c19_9150 Physcomitrium patens
Pp3c21_670 Physcomitrium patens
Pp3c9_9570 Physcomitrium patens
PRCOL_00003473 Prasinoderma coloniale
Prupe.6G362000 Prunus persica
Psat3g102920 Pisum sativum
PSO017G6674 Papaver somniferum
PSO675G5907 Papaver somniferum
QL01p049601 Quercus lobata
RcHm_v2.0_Chr3g0447811 Rosa chinensis
Rhsim05G0170800 Rhododendron simsii
Sabra19G0063100 Salix brachista
SalBow1G3031 Salvia bowleyana
SalBow1G4379 Salvia bowleyana
Sc16g0010430 Simmondsia chinensis
Sed0000944 Sechium edule
Sed0025011 Sechium edule
SEGI_07080 Sequoiadendron giganteum
SEGI_15354 Sequoiadendron giganteum
SEGI_24407 Sequoiadendron giganteum
SEGI_28254 Sequoiadendron giganteum
SEGI_29409 Sequoiadendron giganteum
SEGI_33759 Sequoiadendron giganteum
SGA_v2.0_scaffold11G05812 Striga asiatica
SGA_v2.0_scaffold14G07118 Striga asiatica
SHI13715 Sapria himalayana
SMO141G0244 Selaginella moellendorffii
SMO145G0191 Selaginella moellendorffii
Solyc01g089930.2 Solanum lycopersicum
Solyc01g094230.4 Solanum lycopersicum
Solyc04g056540.3 Solanum lycopersicum
Sopen01g029920 Solanum pennellii
Sopen01g035780 Solanum pennellii
Sopen04g025480 Solanum pennellii
Sp5g14500 Schrenkiella parvula
TAR626G0377 Trochodendron aralioides
THA.LOC104801872 Tarenaya hassleriana
Thecc.05G194100 Theobroma cacao
Thhalv10010225m.g Eutrema salsugineum
TPR.G10693 Trifolium pratense
TWI36G0056 Tripterygium wilfordii
unitig_0.g1013 Utricularia gibba
vmacro19979 Vaccinium macrocarpon
VMungo1383G0580 Vigna mungo
Zm00001eb240960 Zea mays

User provided reference genes

Program Settings