Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p37600 Brassica napus
A10p01370 Brassica napus
Aa31LG1G9890 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4423 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2318 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2238 Anthoceros agrestis
Actinidia12745 Actinidia chinensis
Actinidia21415 Actinidia chinensis
Ah.11g049360 Amaranthus hybridus
AL1G12010 Arabidopsis lyrata
Aqoxy293s004 Aquilegia oxysepala
Aqoxy2G02794 Aquilegia oxysepala
Aqoxy5G00800 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.17AZVE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7GX23T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8ER521 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BSR60Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NH5DW8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QQF2XI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U8589F Arachis hypogaea
AT1G02680 Arabidopsis thaliana
ATR0068G032 Amborella trichopoda
Atru.chr2.1242 Acer truncatum
Atru.chr2.1244 Acer truncatum
Atru.chr5.1040 Acer truncatum
Atru.chr5.1041 Acer truncatum
AUR62011833 Chenopodium quinoa
AUR62024675 Chenopodium quinoa
BcaB03g13505 Brassica carinata
BcaB03g15799 Brassica carinata
BcaC07g36997 Brassica carinata
BolC5t28917H Brassica oleracea
BolC8t46821H Brassica oleracea
BraA08t35657Z Brassica rapa
BraA10t42413Z Brassica rapa
C05p01350 Brassica napus
C08p00190 Brassica napus
CAN.G1164.25 Capsicum annuum
CANSAT01G0603 Cannabis sativa
CANSAT01G2201 Cannabis sativa
CARHR001960 Cardamine hirsuta
Carub.0001s0173 Capsella rubella
Ca_01909_v3 Cicer arietinum L.
Ca_10295_v3 Cicer arietinum L.
Cc06_g14210 Coffea canephora
CDE02G4247 Ceratophyllum demersum
Cfa022415 Carpinus fangiana
Ciclev10002837m.g Citrus clementina
Ciclev10022845m.g Citrus clementina
CiPaw.08G091100 Carya illinoinensis
ClCG09G005230 Citrullus lanatus
COL.COLO4_29184 Corchorus olitorius
Cpa.g.sc18.18 Carica papaya
Cre04.g222100 Chlamydomonas reinhardtii
CsaV3_7G029840 Cucumis sativus L.
CSS0001467 Camellia sinensis var. sinensis
CSS0006628 Camellia sinensis var. sinensis
CSS0028094 Camellia sinensis var. sinensis
DCAR_002518 Daucus carota
DCAR_030468 Daucus carota
Dinv10078 Davidia involucrata
Dinv27220 Davidia involucrata
Duzib147G1635 Durio zibethinus
ECA248G3582 Erigeron canadensis
EL10As5g23505 Beta vulgaris
Eucgr.C00116 Eucalyptus grandis
FAN13G1587 Fragaria x ananassa
FAN14G2614 Fragaria x ananassa
FAN18G2645 Fragaria x ananassa
FvH4_5g39500 Fragaria vesca
FvH4_6g14960 Fragaria vesca
Glyma.10G001200 Glycine max
Glyma.10G002500 Glycine max
Glyma.10G014500 Glycine max
Gohir.A07G224200 Gossypium hirsutum
Gohir.A10G101800 Gossypium hirsutum
Gohir.D07G231500 Gossypium hirsutum
Gohir.D10G086000 Gossypium hirsutum
Gorai.001G266700 Gossypium raimondii
Gorai.011G094200 Gossypium raimondii
GSVIVG01028095001 Vitis vinifera
HanXRQChr01g0000811 Helianthus annuus
HanXRQChr04g0094601 Helianthus annuus
Haze_05017 Corylus avellana
Haze_27741 Corylus avellana
Hma1.2p1_0089F.1_g045460 Hydrangea macrophylla
HPP92_025439 Vanilla planifolia
HPP92_025545 Vanilla planifolia
Hund02934 Selenicereus undatus
Lalb_Chr11g0063261 Lupinus albus
Lj5g0024614 Lotus japonicus
Lsat_1_v5_gn_3_69620 Lactuca sativa
Manes.02G090900 Manihot esculenta
Mapoly0033s0143 Marchantia polymorpha
Mapoly0066s0092 Marchantia polymorpha
MCO05G258 Micromonas commoda
MD02G1287100 Malus domestica
MD02G1287200 Malus domestica
Medtr1g087370 Medicago truncatula
MELO3C015937.2 Cucumis melo
Migut.D00095 Erythranthe guttata
MSTRG.21673 Avicennia marina
Nitab4.5_0002158g0250 Nicotiana tabacum
Nitab4.5_0007940g0040 Nicotiana tabacum
Nn3g21644 Nelumbo nucifera
Nn4g25644 Nelumbo nucifera
Oeu005869.1 Olea europaea
Oeu047382.1 Olea europaea
Os01g0338100 Oryza sativa ssp. japonica
Peaxi162Scf00736g00421 Petunia axillaris
PGR142G0252 Punica granatum
PGSC0003DMG400029688 Solanum tuberosum
Phvul.007G215700 Phaseolus vulgaris
Potri.014G122500 Populus trichocarpa
Pp3c10_23650 Physcomitrium patens
Pp3c20_20300 Physcomitrium patens
PRCOL_00006976 Prasinoderma coloniale
Prupe.2G036200 Prunus persica
Psat6g162520 Pisum sativum
PSO017G1185 Papaver somniferum
PSO339G0583 Papaver somniferum
PSO384G2419 Papaver somniferum
PSO478G0620 Papaver somniferum
PSO478G2484 Papaver somniferum
QL02p082487 Quercus lobata
QL12p029078 Quercus lobata
RcHm_v2.0_Chr4g0410491 Rosa chinensis
RcHm_v2.0_Chr7g0241821 Rosa chinensis
Rhsim01G0289800 Rhododendron simsii
Rhsim13G0006100 Rhododendron simsii
Sabra14G0090900 Salix brachista
SalBow3G4092 Salvia bowleyana
Sc05g0000530 Simmondsia chinensis
Sed0001914 Sechium edule
SEGI_16103 Sequoiadendron giganteum
SGA_v2.0_scaffold376G50268 Striga asiatica
SHI21583 Sapria himalayana
SMO172G0161 Selaginella moellendorffii
Solyc02g078285.1 Solanum lycopersicum
Solyc02g078300.3 Solanum lycopersicum
Solyc06g036200.2 Solanum lycopersicum
Sopen02g023150 Solanum pennellii
Sp1g01660 Schrenkiella parvula
TAR633G1250 Trochodendron aralioides
TAR636G2395 Trochodendron aralioides
THA.LOC104801297 Tarenaya hassleriana
Thecc.04G020200 Theobroma cacao
Thhalv10009111m.g Eutrema salsugineum
TPR.G19757 Trifolium pratense
TWI18G0747 Tripterygium wilfordii
unitig_736.g22945 Utricularia gibba
vmacro02412 Vaccinium macrocarpon
vmacro15120 Vaccinium macrocarpon
Zm00001eb131310 Zea mays

User provided reference genes

Program Settings