Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p07240 Brassica napus
A09p45180 Brassica napus
Aa31LG10G7210 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.206 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.74 Anthoceros agrestis
Actinidia20681 Actinidia chinensis
Actinidia21563 Actinidia chinensis
AL5G32690 Arabidopsis lyrata
Aqoxy1G00294 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.59DMFX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M8XEBR Arachis hypogaea
AT3G52120 Arabidopsis thaliana
ATR0733G146 Amborella trichopoda
Atru.chr11.2638 Acer truncatum
AUR62022266 Chenopodium quinoa
AUR62031974 Chenopodium quinoa
BcaC02g09278 Brassica carinata
BcaNung06094 Brassica carinata
BolC4t25664H Brassica oleracea
BolC8t50356H Brassica oleracea
BraA04t16419Z Brassica rapa
BraA09t39981Z Brassica rapa
C04p40800 Brassica napus
C08p27390 Brassica napus
CAN.G170.130 Capsicum annuum
CANSAT11G0943 Cannabis sativa
CARHR161850 Cardamine hirsuta
CARHR161860 Cardamine hirsuta
Carub.0005s1846 Capsella rubella
Ca_23868_v3 Cicer arietinum L.
CBR_g19876 Chara braunii
Cc02_g27530 Coffea canephora
CDE04G1996 Ceratophyllum demersum
CDE07G1284 Ceratophyllum demersum
CDE10G0170 Ceratophyllum demersum
CDE10G1291 Ceratophyllum demersum
Ciclev10031609m.g Citrus clementina
CiPaw.13G002800 Carya illinoinensis
ClCG09G004330 Citrullus lanatus
COL.COLO4_23900 Corchorus olitorius
Cpa.g.sc234.14 Carica papaya
Cre02.g105287 Chlamydomonas reinhardtii
Cre16.g686000 Chlamydomonas reinhardtii
CsaV3_7G031250 Cucumis sativus L.
CSS0016942 Camellia sinensis var. sinensis
CSS0030425 Camellia sinensis var. sinensis
DCAR_029646 Daucus carota
DCAR_029653 Daucus carota
Dinv09378 Davidia involucrata
Dinv43463 Davidia involucrata
Duzib138G0206 Durio zibethinus
Duzib268G1355 Durio zibethinus
ECA246G0971 Erigeron canadensis
EL10Ac9g21166 Beta vulgaris
Eucgr.A02263 Eucalyptus grandis
Eucgr.B02099 Eucalyptus grandis
Eucgr.G03395 Eucalyptus grandis
Eucgr.J01259 Eucalyptus grandis
FAN01G2446 Fragaria x ananassa
FAN01G2822 Fragaria x ananassa
FAN03G2451 Fragaria x ananassa
FAN06G5068 Fragaria x ananassa
FAN10G3515 Fragaria x ananassa
FvH4_7g00680 Fragaria vesca
Glyma.08G152600 Glycine max
Glyma.15G272000 Glycine max
Gohir.A08G027150 Gossypium hirsutum
Gohir.A08G145800 Gossypium hirsutum
Gohir.D08G037900 Gossypium hirsutum
Gohir.D08G166700 Gossypium hirsutum
Gorai.004G035900 Gossypium raimondii
Gorai.004G174100 Gossypium raimondii
GSVIVG01032056001 Vitis vinifera
HanXRQChr15g0479141 Helianthus annuus
Haze_03237 Corylus avellana
Hma1.2p1_0845F.1_g227490 Hydrangea macrophylla
HPP92_022791 Vanilla planifolia
Hund03669 Selenicereus undatus
Hund07648 Selenicereus undatus
Lalb_Chr01g0008111 Lupinus albus
Lalb_Chr19g0132061 Lupinus albus
Lj3g0000927 Lotus japonicus
Lj3g0006296 Lotus japonicus
Lj7C568G16 Lonicera japonica
Lsat_1_v5_gn_4_68280 Lactuca sativa
Manes.07G003900 Manihot esculenta
Manes.10G146300 Manihot esculenta
Mapoly0063s0041 Marchantia polymorpha
MBI01_g36433_MAGBIO Magnolia biondii
MBI04_g14260_MAGBIO Magnolia biondii
MCO15G372 Micromonas commoda
MD02G1315400 Malus domestica
MD07G1006500 Malus domestica
Medtr8g036255 Medicago truncatula
Medtr8g036260 Medicago truncatula
Medtr8g036890 Medicago truncatula
MELO3C023531.2 Cucumis melo
Migut.N01482 Erythranthe guttata
MSTRG.20603 Avicennia marina
Nitab4.5_0001542g0040 Nicotiana tabacum
Nitab4.5_0006850g0010 Nicotiana tabacum
Nn2g15504 Nelumbo nucifera
Nn7g36099 Nelumbo nucifera
Oeu006578.1 Olea europaea
Oeu014580.2 Olea europaea
Os09g0281600 Oryza sativa ssp. japonica
Peaxi162Scf00428g00096 Petunia axillaris
PGR044G1403 Punica granatum
PGSC0003DMG400025264 Solanum tuberosum
Phvul.005G036800 Phaseolus vulgaris
Potri.001G269900 Populus trichocarpa
Potri.009G064600 Populus trichocarpa
Pp3c11_4670 Physcomitrium patens
Pp3c11_4770 Physcomitrium patens
Pp3c7_22470 Physcomitrium patens
Prupe.2G009600 Prunus persica
Psat4g149360 Pisum sativum
PSO339G6673 Papaver somniferum
PSO384G1867 Papaver somniferum
QL04p005208 Quercus lobata
RcHm_v2.0_Chr1g0314901 Rosa chinensis
Rhsim01G0130900 Rhododendron simsii
Sabra09G0047800 Salix brachista
Sabra16G0165300 Salix brachista
SalBow4G2313 Salvia bowleyana
SalBow5G0866 Salvia bowleyana
SalBow5G5194 Salvia bowleyana
Sc15g0001680 Simmondsia chinensis
Sed0007108 Sechium edule
Sed0027076 Sechium edule
SEGI_00751 Sequoiadendron giganteum
SGA_v2.0_scaffold95G28788 Striga asiatica
SHI47607 Sapria himalayana
SHI47732 Sapria himalayana
SMO358G0717 Selaginella moellendorffii
Solyc01g086890.3 Solanum lycopersicum
Sopen01g033900 Solanum pennellii
Sp5g10160 Schrenkiella parvula
TAR623G0421 Trochodendron aralioides
TAR623G0847 Trochodendron aralioides
TAR633G2005 Trochodendron aralioides
TAR636G1066 Trochodendron aralioides
THA.LOC104801982 Tarenaya hassleriana
Thecc.01G414000 Theobroma cacao
Thhalv10010376m.g Eutrema salsugineum
TPR.G21739 Trifolium pratense
TWI09G1360 Tripterygium wilfordii
TWI73G0859 Tripterygium wilfordii
unitig_0.g1380 Utricularia gibba
unitig_0.g1381 Utricularia gibba
unitig_61.g26449 Utricularia gibba
vmacro21177 Vaccinium macrocarpon
VMungo1080G1418 Vigna mungo
Zm00001eb325220 Zea mays

User provided reference genes

Program Settings