Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p08340 Brassica napus
A08p33210 Brassica napus
A09p64310 Brassica napus
Aa31LG1G2870 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1952 Anthoceros agrestis
Actinidia05506 Actinidia chinensis
Actinidia11861 Actinidia chinensis
Actinidia15969 Actinidia chinensis
Actinidia26902 Actinidia chinensis
Ah.09g234740 Amaranthus hybridus
Ah.14g087950 Amaranthus hybridus
AL1G23030 Arabidopsis lyrata
Aqoxy1G03119 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.EH8QHL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PLZ2LX Arachis hypogaea
AT1G11860 Arabidopsis thaliana
ATR0794G107 Amborella trichopoda
Atru.chr10.2254 Acer truncatum
Atru.chr8.531 Acer truncatum
Atru.chr8.533 Acer truncatum
AUR62012328 Chenopodium quinoa
AUR62022970 Chenopodium quinoa
BcaB03g13227 Brassica carinata
BolC8t49127H Brassica oleracea
BolC8t52329H Brassica oleracea
BraA08t35239Z Brassica rapa
BraA09t41774Z Brassica rapa
C08p14960 Brassica napus
C08p47920 Brassica napus
CAN.G1014.12 Capsicum annuum
CANSAT56G2555 Cannabis sativa
CARHR012170 Cardamine hirsuta
Carub.0001s1151 Capsella rubella
Ca_21072_v3 Cicer arietinum L.
CBR_g24348 Chara braunii
Cc09_g01490 Coffea canephora
CDE02G4424 Ceratophyllum demersum
CDE05G1701 Ceratophyllum demersum
Cfa000202 Carpinus fangiana
Cfa026602 Carpinus fangiana
Ciclev10015433m.g Citrus clementina
CiPaw.09G093700 Carya illinoinensis
CiPaw.10G073000 Carya illinoinensis
ClCG03G004610 Citrullus lanatus
COL.COLO4_31797 Corchorus olitorius
Cpa.g.sc152.29 Carica papaya
Cre03.g193750 Chlamydomonas reinhardtii
CsaV3_1G010620 Cucumis sativus L.
CSS0014504 Camellia sinensis var. sinensis
DCAR_008168 Daucus carota
Dinv13913 Davidia involucrata
Dinv20065 Davidia involucrata
Duzib192G0808 Durio zibethinus
ECA236G1893 Erigeron canadensis
EL10Ac1g01135 Beta vulgaris
EL10Ac2g03767 Beta vulgaris
EL10Ac6g15683 Beta vulgaris
Eucgr.E03909 Eucalyptus grandis
Eucgr.L02773 Eucalyptus grandis
FAN21G1227 Fragaria x ananassa
FAN25G0478 Fragaria x ananassa
FvH4_3g01820 Fragaria vesca
Glyma.07G262100 Glycine max
Glyma.09G004700 Glycine max
Glyma.15G109300 Glycine max
Glyma.17G012000 Glycine max
Gohir.A05G171500 Gossypium hirsutum
Gohir.A06G149200 Gossypium hirsutum
Gohir.D05G174600 Gossypium hirsutum
Gohir.D06G155300 Gossypium hirsutum
Gorai.009G179900 Gossypium raimondii
Gorai.010G181500 Gossypium raimondii
GSVIVG01012702001 Vitis vinifera
HanXRQChr15g0470421 Helianthus annuus
Haze_06821 Corylus avellana
Haze_26660 Corylus avellana
Hma1.2p1_0091F.1_g046500 Hydrangea macrophylla
Hma1.2p1_0298F.1_g117720 Hydrangea macrophylla
HPP92_004130 Vanilla planifolia
Hund21422 Selenicereus undatus
Hund23455 Selenicereus undatus
Lalb_Chr15g0087671 Lupinus albus
Lalb_Chr18g0056491 Lupinus albus
Lalb_Chr20g0118761 Lupinus albus
Lj1A1232G87 Lonicera japonica
Lj6g0010262 Lotus japonicus
Lsat_1_v5_gn_7_16480 Lactuca sativa
Manes.17G025900 Manihot esculenta
Mapoly0129s0024 Marchantia polymorpha
MBI02_g15378_MAGBIO Magnolia biondii
MCO15G045 Micromonas commoda
MD05G1348800 Malus domestica
MD10G1323700 Malus domestica
Medtr4g132360 Medicago truncatula
MELO3C002444.2 Cucumis melo
Migut.M01336 Erythranthe guttata
MSTRG.14637 Avicennia marina
MSTRG.7197 Avicennia marina
Nitab4.5_0002695g0040 Nicotiana tabacum
Nitab4.5_0007963g0010 Nicotiana tabacum
Nn030s41595 Nelumbo nucifera
Nn1g03473 Nelumbo nucifera
Oeu002744.1 Olea europaea
Oeu013835.1 Olea europaea
Oeu040336.3 Olea europaea
Os04g0623800 Oryza sativa ssp. japonica
Peaxi162Scf00131g01117 Petunia axillaris
PGR142G1596 Punica granatum
PGSC0003DMG400016444 Solanum tuberosum
Phvul.003G080400 Phaseolus vulgaris
Phvul.006G148700 Phaseolus vulgaris
Potri.004G009600 Populus trichocarpa
Potri.011G006800 Populus trichocarpa
Pp3c12_9500 Physcomitrium patens
Pp3c4_15010 Physcomitrium patens
PRCOL_00007041 Prasinoderma coloniale
Prupe.4G018500 Prunus persica
Psat4g005920 Pisum sativum
PSO541G3045 Papaver somniferum
PSO675G1799 Papaver somniferum
QL02p099920 Quercus lobata
QL05p072692 Quercus lobata
RcHm_v2.0_Chr5g0002651 Rosa chinensis
Rhsim13G0152700 Rhododendron simsii
RhsimUnG0232700 Rhododendron simsii
Sabra04G0005000 Salix brachista
Sabra11G0005900 Salix brachista
SalBow8G0639 Salvia bowleyana
Sc05g0009310 Simmondsia chinensis
Sc24g0000220 Simmondsia chinensis
Sed0006727 Sechium edule
Sed0013135 Sechium edule
SEGI_27497 Sequoiadendron giganteum
SGA_v2.0_scaffold7G03812 Striga asiatica
SHI00401 Sapria himalayana
SMO352G0047 Selaginella moellendorffii
Solyc02g080810.3 Solanum lycopersicum
Sopen02g025500 Solanum pennellii
Sopen07g011340 Solanum pennellii
Sp1g10470 Schrenkiella parvula
TAR626G0807 Trochodendron aralioides
TAR627G1106 Trochodendron aralioides
TAR629G2745 Trochodendron aralioides
THA.LOC104809494 Tarenaya hassleriana
Thecc.06G223500 Theobroma cacao
Thhalv10007781m.g Eutrema salsugineum
TPR.G37066 Trifolium pratense
TWI38G1114 Tripterygium wilfordii
TWI63G0560 Tripterygium wilfordii
unitig_92.g28113 Utricularia gibba
vmacro03682 Vaccinium macrocarpon
vmacro22539 Vaccinium macrocarpon
VMungo1215G1817 Vigna mungo
Zm00001eb070250 Zea mays

User provided reference genes

Program Settings