Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p32820 Brassica napus
A09p56420 Brassica napus
Aa31LG8G3880 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4680 Anthoceros agrestis
Actinidia18636 Actinidia chinensis
Actinidia40307 Actinidia chinensis
AL3G29730 Arabidopsis lyrata
Aqoxy5G00804 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0U01EG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D8AA3B Arachis hypogaea
AT3G16810 Arabidopsis thaliana
ATR0693G185 Amborella trichopoda
Atru.chr4.2923 Acer truncatum
AUR62015585 Chenopodium quinoa
AUR62016163 Chenopodium quinoa
AUR62035077 Chenopodium quinoa
BcaB04g18910 Brassica carinata
BcaB06g25777 Brassica carinata
BcaC04g21315 Brassica carinata
BcaC05g26176 Brassica carinata
BcaC05g28847 Brassica carinata
BcaC05g28849 Brassica carinata
BolC5t30856H Brassica oleracea
BolC5t33706H Brassica oleracea
BolC9t56162H Brassica oleracea
BraA05t22104Z Brassica rapa
BraA09t41036Z Brassica rapa
C05p21600 Brassica napus
C05p49530 Brassica napus
C09p33250 Brassica napus
CAN.G1132.3 Capsicum annuum
CAN.G14.7 Capsicum annuum
CANSAT78G1075 Cannabis sativa
CARHR092060 Cardamine hirsuta
Carub.0003s1652 Capsella rubella
Ca_21472_v3 Cicer arietinum L.
CBR_g50950 Chara braunii
Cc03_g01340 Coffea canephora
CDE02G0409 Ceratophyllum demersum
CDE09G0311 Ceratophyllum demersum
CDE09G1302 Ceratophyllum demersum
Cfa015449 Carpinus fangiana
Cfa022899 Carpinus fangiana
Ciclev10004585m.g Citrus clementina
CiPaw.02G079000 Carya illinoinensis
ClCG06G004870 Citrullus lanatus
COL.COLO4_34697 Corchorus olitorius
Cpa.g.sc9.115 Carica papaya
Cre12.g528950 Chlamydomonas reinhardtii
CsaV3_6G022660 Cucumis sativus L.
CSS0008369 Camellia sinensis var. sinensis
CSS0024712 Camellia sinensis var. sinensis
DCAR_027042 Daucus carota
Dinv29709 Davidia involucrata
Duzib151G1106 Durio zibethinus
ECA240G4356 Erigeron canadensis
EL10Ac3g04940 Beta vulgaris
Eucgr.E01101 Eucalyptus grandis
FAN07G2363 Fragaria x ananassa
FAN12G2191 Fragaria x ananassa
FAN12G3151 Fragaria x ananassa
FAN17G1707 Fragaria x ananassa
FvH4_4g18900 Fragaria vesca
Glyma.07G244300 Glycine max
Glyma.08G191100 Glycine max
Glyma.17G029600 Glycine max
Gohir.A09G063500 Gossypium hirsutum
Gohir.D09G062400 Gossypium hirsutum
Gorai.006G077200 Gossypium raimondii
GSVIVG01035090001 Vitis vinifera
HanXRQChr03g0085471 Helianthus annuus
Haze_01138 Corylus avellana
Haze_01142 Corylus avellana
Hma1.2p1_0078F.1_g040270 Hydrangea macrophylla
Hma1.2p1_0078F.1_g040280 Hydrangea macrophylla
Hma1.2p1_0078F.1_g040290 Hydrangea macrophylla
HPP92_010664 Vanilla planifolia
HPP92_010686 Vanilla planifolia
Hund11943 Selenicereus undatus
Lalb_Chr12g0201101 Lupinus albus
Lalb_Chr12g0201111 Lupinus albus
Lalb_Chr12g0201121 Lupinus albus
Lalb_Chr13g0298261 Lupinus albus
Lj4g0015807 Lotus japonicus
Lj6A683G52 Lonicera japonica
Lsat_1_v5_gn_6_76160 Lactuca sativa
Manes.03G200000 Manihot esculenta
Mapoly0099s0044 Marchantia polymorpha
MBI18_g04559_MAGBIO Magnolia biondii
MCO02G008 Micromonas commoda
MD13G1162200 Malus domestica
MD16G1162000 Malus domestica
Medtr4g120460 Medicago truncatula
Medtr4g120470 Medicago truncatula
MELO3C021296.2 Cucumis melo
Migut.N00065 Erythranthe guttata
MSTRG.24809 Avicennia marina
Nitab4.5_0000361g0050 Nicotiana tabacum
Nitab4.5_0007304g0010 Nicotiana tabacum
Nn3g21575 Nelumbo nucifera
Nn4g25712 Nelumbo nucifera
Oeu006429.1 Olea europaea
Oeu054008.1 Olea europaea
Os03g0831100 Oryza sativa ssp. japonica
Peaxi162Scf00065g01018 Petunia axillaris
PGR004G0606 Punica granatum
PGSC0003DMG400001190 Solanum tuberosum
Phvul.003G108600 Phaseolus vulgaris
Potri.008G211400 Populus trichocarpa
Potri.010G005600 Populus trichocarpa
Pp3c5_10580 Physcomitrium patens
PRCOL_00000476 Prasinoderma coloniale
Prupe.1G129500 Prunus persica
Psat1g126080 Pisum sativum
Psat1g126160 Pisum sativum
Psat4g024680 Pisum sativum
Psat5g033800 Pisum sativum
PSO731G0023 Papaver somniferum
PSO764G0237 Papaver somniferum
QL06p010892 Quercus lobata
RcHm_v2.0_Chr4g0423801 Rosa chinensis
Rhsim04G0228200 Rhododendron simsii
Sabra10G0004800 Salix brachista
SalBow1G8756 Salvia bowleyana
SalBow5G3355 Salvia bowleyana
Sc19g0003370 Simmondsia chinensis
Sed0023608 Sechium edule
SEGI_16207 Sequoiadendron giganteum
SGA_v2.0_scaffold119G32697 Striga asiatica
SGA_v2.0_scaffold594G53106 Striga asiatica
SHI00201 Sapria himalayana
SMO367G0742 Selaginella moellendorffii
Solyc01g065580.4 Solanum lycopersicum
Sopen01g026980 Solanum pennellii
Sp3g15060 Schrenkiella parvula
TAR362G0678 Trochodendron aralioides
THA.LOC104802592 Tarenaya hassleriana
Thecc.04G291000 Theobroma cacao
Thhalv10020259m.g Eutrema salsugineum
TPR.G22770 Trifolium pratense
TWI09G0846 Tripterygium wilfordii
TWI73G1272 Tripterygium wilfordii
unitig_747.g21102 Utricularia gibba
vmacro08098 Vaccinium macrocarpon
VMungo1215G3292 Vigna mungo
Zm00001eb063600 Zea mays
Zm00001eb103920 Zea mays
Zm00001eb103930 Zea mays
Zm00001eb160280 Zea mays
Zm00001eb246110 Zea mays
Zm00001eb253290 Zea mays
Zm00001eb258700 Zea mays
Zm00001eb355950 Zea mays
Zm00001eb400440 Zea mays

User provided reference genes

Program Settings