Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p10540 Brassica napus
Aa31LG9G17630 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2680 Anthoceros agrestis
Actinidia28787 Actinidia chinensis
Actinidia35715 Actinidia chinensis
Ah.02g128700 Amaranthus hybridus
AL7G46000 Arabidopsis lyrata
Aqoxy5G00268 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.SAK0JK Arachis hypogaea
AT5G37370 Arabidopsis thaliana
ATR0083G043 Amborella trichopoda
ATR0127G005 Amborella trichopoda
Atru.chr1.1954 Acer truncatum
AUR62017457 Chenopodium quinoa
AUR62032521 Chenopodium quinoa
BcaC02g09560 Brassica carinata
BolC4t25993H Brassica oleracea
BraA04t16720Z Brassica rapa
C04p44180 Brassica napus
CAN.G525.4 Capsicum annuum
CANSAT78G2338 Cannabis sativa
CARHR215720 Cardamine hirsuta
Carub.0007s3249 Capsella rubella
Ca_05772_v3 Cicer arietinum L.
CBR_g22246 Chara braunii
Cc07_g12960 Coffea canephora
CDE02G0598 Ceratophyllum demersum
CDE02G0875 Ceratophyllum demersum
CDE02G1258 Ceratophyllum demersum
CDE02G3274 Ceratophyllum demersum
CDE02G3573 Ceratophyllum demersum
Cfa007768 Carpinus fangiana
Ciclev10015797m.g Citrus clementina
Ciclev10018227m.g Citrus clementina
CiPaw.03G077600 Carya illinoinensis
ClCG01G008650 Citrullus lanatus
COL.COLO4_05842 Corchorus olitorius
Cpa.g.sc178.7 Carica papaya
Cre03.g178300 Chlamydomonas reinhardtii
CsaV3_5G020660 Cucumis sativus L.
CSS0001926 Camellia sinensis var. sinensis
CSS0036345 Camellia sinensis var. sinensis
CSS0045560 Camellia sinensis var. sinensis
DCAR_028435 Daucus carota
Dinv19070 Davidia involucrata
Dinv28230 Davidia involucrata
Duzib211G0206 Durio zibethinus
EL10Ac6g13916 Beta vulgaris
Eucgr.J01630 Eucalyptus grandis
FAN05G2233 Fragaria x ananassa
FAN07G0829 Fragaria x ananassa
FAN07G1815 Fragaria x ananassa
FAN12G3741 Fragaria x ananassa
FAN17G2568 Fragaria x ananassa
FAN22G0974 Fragaria x ananassa
FAN23G0276 Fragaria x ananassa
FvH4_4g06670 Fragaria vesca
Glyma.02G241900 Glycine max
Glyma.14G211600 Glycine max
Gohir.A02G124601 Gossypium hirsutum
Gohir.A08G052900 Gossypium hirsutum
Gohir.A08G086562 Gossypium hirsutum
Gohir.A11G193800 Gossypium hirsutum
Gohir.D08G062500 Gossypium hirsutum
Gorai.004G064700 Gossypium raimondii
GSVIVG01026312001 Vitis vinifera
HanXRQChr08g0218471 Helianthus annuus
HanXRQChr08g0224021 Helianthus annuus
HanXRQChr14g0429051 Helianthus annuus
HanXRQChr14g0429111 Helianthus annuus
Haze_14305 Corylus avellana
Hma1.2p1_0034F.1_g021310 Hydrangea macrophylla
Hma1.2p1_0158F.1_g069800 Hydrangea macrophylla
HPP92_017811 Vanilla planifolia
Lalb_Chr04g0251441 Lupinus albus
Lalb_Chr10g0104091 Lupinus albus
Lalb_Chr10g0104101 Lupinus albus
Lalb_Chr17g0345901 Lupinus albus
Lj1g0013060 Lotus japonicus
Lj1g0013083 Lotus japonicus
Lj2C513G15 Lonicera japonica
Lj2g0009880 Lotus japonicus
Lj4A255T24 Lonicera japonica
LjContig00141g0012428 Lotus japonicus
Lsat_1_v5_gn_8_18601 Lactuca sativa
Manes.02G080000 Manihot esculenta
Mapoly0017s0020 Marchantia polymorpha
MapolyY_B0025 Marchantia polymorpha
MBI04_g35346_MAGBIO Magnolia biondii
MCO07G113 Micromonas commoda
MD01G1153700 Malus domestica
MD13G1237000 Malus domestica
MD16G1242400 Malus domestica
Medtr5g077180 Medicago truncatula
MELO3C025080.2 Cucumis melo
Migut.H02243 Erythranthe guttata
Migut.K01113 Erythranthe guttata
MSTRG.3686 Avicennia marina
Nitab4.5_0000574g0160 Nicotiana tabacum
Nitab4.5_0005193g0040 Nicotiana tabacum
Nn1g02020 Nelumbo nucifera
Oeu029083.1 Olea europaea
Oeu032315.1 Olea europaea
Oeu048972.1 Olea europaea
Os05g0178900 Oryza sativa ssp. japonica
Os06g0143600 Oryza sativa ssp. japonica
Peaxi162Scf00442g00627 Petunia axillaris
PGR042G1215 Punica granatum
PGSC0003DMG400023617 Solanum tuberosum
Phvul.008G239200 Phaseolus vulgaris
Potri.004G075700 Populus trichocarpa
Potri.017G144121 Populus trichocarpa
Pp3c14_14980 Physcomitrium patens
Pp3c14_14989 Physcomitrium patens
Pp3c17_5870 Physcomitrium patens
PRCOL_00000163 Prasinoderma coloniale
Prupe.1G069400 Prunus persica
Psat2g044720 Pisum sativum
PSO017G5633 Papaver somniferum
PSO170G3102 Papaver somniferum
QL02p060102 Quercus lobata
RcHm_v2.0_Chr4g0398571 Rosa chinensis
Rhsim10G0183300 Rhododendron simsii
Sabra04G0050400 Salix brachista
Sc11g0004750 Simmondsia chinensis
Sed0001997 Sechium edule
Sed0006929 Sechium edule
Sed0026946 Sechium edule
SEGI_40758 Sequoiadendron giganteum
SGA_v2.0_scaffold115G32089 Striga asiatica
SGA_v2.0_scaffold45G17131 Striga asiatica
SMO231G0020 Selaginella moellendorffii
SMO231G0026 Selaginella moellendorffii
SMO351G0501 Selaginella moellendorffii
Solyc04g014560.4 Solanum lycopersicum
Sopen04g006720 Solanum pennellii
Sp7g05100 Schrenkiella parvula
TAR374G1377 Trochodendron aralioides
TAR375G0174 Trochodendron aralioides
THA.LOC104823824 Tarenaya hassleriana
Thecc.04G060900 Theobroma cacao
Thhalv10027788m.g Eutrema salsugineum
TPR.G9995 Trifolium pratense
TWI74G1557 Tripterygium wilfordii
TWI77G0470 Tripterygium wilfordii
unitig_748.g7024 Utricularia gibba
vmacro20487 Vaccinium macrocarpon
VMungo0647G0921 Vigna mungo
Zm00001eb046660 Zea mays
Zm00001eb221230 Zea mays
Zm00001eb283000 Zea mays
Zm00001eb313200 Zea mays
Zm00001eb361740 Zea mays
Zm00001eb377290 Zea mays

User provided reference genes

Program Settings