Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p28420 Brassica napus
A09p07440 Brassica napus
Aa31LG11G1720 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2675 Anthoceros agrestis
Actinidia01484 Actinidia chinensis
Actinidia15830 Actinidia chinensis
Actinidia16175 Actinidia chinensis
Actinidia16176 Actinidia chinensis
Actinidia32212 Actinidia chinensis
Actinidia32213 Actinidia chinensis
Ah.08g213470 Amaranthus hybridus
Ah.15g093220 Amaranthus hybridus
AL8G38530 Arabidopsis lyrata
Aqoxy2G02947 Aquilegia oxysepala
Aqoxy311s002 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.81M7HI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.89EUFG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B7L3V1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JRXS1U Arachis hypogaea
AT5G61770 Arabidopsis thaliana
ATR0584G246 Amborella trichopoda
Atru.chr5.901 Acer truncatum
AUR62008626 Chenopodium quinoa
AUR62033145 Chenopodium quinoa
AUR62033152 Chenopodium quinoa
BcaB02g09600 Brassica carinata
BcaC01g02428 Brassica carinata
BcaC04g23436 Brassica carinata
BcaNung01420 Brassica carinata
BolC3t18792H Brassica oleracea
BolC9t53745H Brassica oleracea
BraA06t25786Z Brassica rapa
BraA09t36398Z Brassica rapa
C03p65390 Brassica napus
C09p08350 Brassica napus
CAN.G134.43 Capsicum annuum
CANSAT54G1658 Cannabis sativa
CARHR275530 Cardamine hirsuta
Carub.0008s2246 Capsella rubella
Ca_19020_v3 Cicer arietinum L.
CBR_g227 Chara braunii
Cc09_g07750 Coffea canephora
CDE09G1083 Ceratophyllum demersum
Cfa026076 Carpinus fangiana
Ciclev10023300m.g Citrus clementina
CiPaw.14G100000 Carya illinoinensis
ClCG10G010920 Citrullus lanatus
COL.COLO4_23348 Corchorus olitorius
Cpa.g.sc16.169 Carica papaya
Cre10.g450879 Chlamydomonas reinhardtii
CsaV3_4G000800 Cucumis sativus L.
CSS0011058 Camellia sinensis var. sinensis
DCAR_012396 Daucus carota
Dinv37873 Davidia involucrata
Duzib133G0229 Durio zibethinus
Duzib138G1754 Durio zibethinus
ECA238G0492 Erigeron canadensis
Eucgr.K03479 Eucalyptus grandis
FAN15G2487 Fragaria x ananassa
FAN20G2170 Fragaria x ananassa
FAN24G0086 Fragaria x ananassa
FAN27G0535 Fragaria x ananassa
FvH4_2g25700 Fragaria vesca
Glyma.11G100700 Glycine max
Glyma.12G026700 Glycine max
Gohir.A08G117800 Gossypium hirsutum
Gohir.D02G011800 Gossypium hirsutum
Gohir.D02G011833 Gossypium hirsutum
Gohir.D04G081932 Gossypium hirsutum
Gohir.D05G337000 Gossypium hirsutum
Gohir.D08G138800 Gossypium hirsutum
Gohir.D11G077800 Gossypium hirsutum
Gorai.002G117300 Gossypium raimondii
Gorai.004G142400 Gossypium raimondii
Gorai.005G015000 Gossypium raimondii
Gorai.007G256100 Gossypium raimondii
Gorai.009G361200 Gossypium raimondii
Gorai.012G092400 Gossypium raimondii
GSVIVG01028012001 Vitis vinifera
HanXRQChr08g0207921 Helianthus annuus
HanXRQChr12g0368811 Helianthus annuus
HanXRQChr17g0559061 Helianthus annuus
Haze_04935 Corylus avellana
Haze_24929 Corylus avellana
Haze_27315 Corylus avellana
Hma1.2p1_1471F.1_g285675 Hydrangea macrophylla
Hma1.2p1_1471F.1_g285690 Hydrangea macrophylla
HPP92_002997 Vanilla planifolia
Hund05425 Selenicereus undatus
Lalb_Chr01g0001441 Lupinus albus
Lj2A1194G52 Lonicera japonica
Lj3g0027269 Lotus japonicus
Lsat_1_v5_gn_4_87281 Lactuca sativa
Manes.01G218800 Manihot esculenta
Mapoly0097s0041 Marchantia polymorpha
MBI18_g06877_MAGBIO Magnolia biondii
MCO08G191 Micromonas commoda
MD03G1288000 Malus domestica
MD08G1232400 Malus domestica
MD11G1310300 Malus domestica
Medtr4g075050 Medicago truncatula
MELO3C017956.2 Cucumis melo
Migut.B01152 Erythranthe guttata
Migut.D00217 Erythranthe guttata
MSTRG.18152 Avicennia marina
Nitab4.5_0002687g0080 Nicotiana tabacum
Nitab4.5_0008999g0010 Nicotiana tabacum
Nn3g21484 Nelumbo nucifera
Oeu011458.1 Olea europaea
Oeu046682.2 Olea europaea
Os03g0343700 Oryza sativa ssp. japonica
Peaxi162Scf01084g00120 Petunia axillaris
PGR044G2668 Punica granatum
PGSC0003DMG400004411 Solanum tuberosum
PGSC0003DMG401027528 Solanum tuberosum
Phvul.011G029700 Phaseolus vulgaris
Potri.002G204900 Populus trichocarpa
Potri.014G129700 Populus trichocarpa
Pp3c2_30030 Physcomitrium patens
PRCOL_00006477 Prasinoderma coloniale
Prupe.8G261200 Prunus persica
Psat7g177400 Pisum sativum
PSO017G3074 Papaver somniferum
PSO170G0569 Papaver somniferum
PSO210G3006 Papaver somniferum
PSO832G3876 Papaver somniferum
QL09p032163 Quercus lobata
QL12p028506 Quercus lobata
RcHm_v2.0_Chr6g0293981 Rosa chinensis
Rhsim01G0243400 Rhododendron simsii
Sabra02G0154600 Salix brachista
Sabra14G0096300 Salix brachista
SalBow3G1002 Salvia bowleyana
Sc17g0002740 Simmondsia chinensis
Sed0000474 Sechium edule
Sed0023746 Sechium edule
SGA_v2.0_scaffold1G00368 Striga asiatica
SGA_v2.0_scaffold2G01394 Striga asiatica
SMO331G0088 Selaginella moellendorffii
Solyc01g096800.3 Solanum lycopersicum
Sopen01g040500 Solanum pennellii
Sp2g24970 Schrenkiella parvula
TAR365G0243 Trochodendron aralioides
TAR629G0138 Trochodendron aralioides
TAR636G3371 Trochodendron aralioides
THA.LOC104801723 Tarenaya hassleriana
THA.LOC104818291 Tarenaya hassleriana
Thecc.01G300100 Theobroma cacao
Thhalv10004503m.g Eutrema salsugineum
TPR.G32348 Trifolium pratense
TWI59G0801 Tripterygium wilfordii
unitig_26.g10170 Utricularia gibba
vmacro15009 Vaccinium macrocarpon
VMungo1127G1640 Vigna mungo
Zm00001eb016460 Zea mays

User provided reference genes

Program Settings