Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p06580 Brassica napus
A07p21280 Brassica napus
Aa31LG10G7820 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2040 Anthoceros agrestis
Actinidia14554 Actinidia chinensis
AL5G33690 Arabidopsis lyrata
Aqoxy6G02772 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1HA888 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4Y2W44 Arachis hypogaea
AT3G52905 Arabidopsis thaliana
ATR0782G239 Amborella trichopoda
Atru.chr1.3074 Acer truncatum
Atru.chr1.3075 Acer truncatum
Atru.chr1.4012 Acer truncatum
Atru.chr1.4028 Acer truncatum
Atru.chr1.4031 Acer truncatum
Atru.chr1.4034 Acer truncatum
Atru.chr1.4089 Acer truncatum
Atru.chr11.10 Acer truncatum
Atru.chr11.9 Acer truncatum
Atru.chr12.1177 Acer truncatum
Atru.chr12.1179 Acer truncatum
Atru.chr12.1394 Acer truncatum
Atru.chr12.1688 Acer truncatum
Atru.chr12.1697 Acer truncatum
Atru.chr13.1180 Acer truncatum
Atru.chr13.1520 Acer truncatum
Atru.chr2.2103 Acer truncatum
Atru.chr2.774 Acer truncatum
Atru.chr2.779 Acer truncatum
Atru.chr2.781 Acer truncatum
Atru.chr3.997 Acer truncatum
Atru.chr4.1966 Acer truncatum
Atru.chr4.1967 Acer truncatum
Atru.chr4.1970 Acer truncatum
Atru.chr4.1971 Acer truncatum
Atru.chr4.898 Acer truncatum
Atru.chr5.2738 Acer truncatum
Atru.chr5.3476 Acer truncatum
Atru.chr5.3478 Acer truncatum
Atru.chr6.144 Acer truncatum
Atru.chr6.169 Acer truncatum
Atru.chr6.77 Acer truncatum
Atru.chr6.94 Acer truncatum
Atru.chr6.95 Acer truncatum
Atru.chr7.1970 Acer truncatum
Atru.chr7.1971 Acer truncatum
Atru.chr8.1290 Acer truncatum
Atru.chr8.895 Acer truncatum
AUR62010668 Chenopodium quinoa
AUR62017215 Chenopodium quinoa
BcaB02g07803 Brassica carinata
BcaB02g08548 Brassica carinata
BcaC02g09203 Brassica carinata
BcaC08g44605 Brassica carinata
BolC4t25575H Brassica oleracea
BolC6t37261H Brassica oleracea
BraA04t16363Z Brassica rapa
BraA07t29816Z Brassica rapa
C04p40020 Brassica napus
C06p20780 Brassica napus
CAN.G1149.8 Capsicum annuum
CANSAT21G0205 Cannabis sativa
CARHR162770 Cardamine hirsuta
Carub.0005s1938 Capsella rubella
Cc08_g14650 Coffea canephora
CDE04G2100 Ceratophyllum demersum
Ciclev10006013m.g Citrus clementina
Ciclev10022882m.g Citrus clementina
CiPaw.11G135900 Carya illinoinensis
ClCG01G002790 Citrullus lanatus
COL.COLO4_34453 Corchorus olitorius
Cpa.g.sc128.49 Carica papaya
CsaV3_5G002870 Cucumis sativus L.
CSS0013453 Camellia sinensis var. sinensis
DCAR_008401 Daucus carota
Dinv38949 Davidia involucrata
Duzib084G0936 Durio zibethinus
ECA240G0629 Erigeron canadensis
ECA240G3910 Erigeron canadensis
ECA246G0717 Erigeron canadensis
ECA246G4230 Erigeron canadensis
ECA248G3864 Erigeron canadensis
EL10Ac6g13984 Beta vulgaris
Eucgr.E00580 Eucalyptus grandis
Eucgr.E00582 Eucalyptus grandis
FAN04G3051 Fragaria x ananassa
FvH4_5g02300 Fragaria vesca
Glyma.01G219700 Glycine max
Glyma.11G023800 Glycine max
Gohir.A08G182200 Gossypium hirsutum
Gohir.D08G200800 Gossypium hirsutum
Gorai.004G211600 Gossypium raimondii
GSVIVG01019762001 Vitis vinifera
HanXRQChr06g0165541 Helianthus annuus
Haze_08850 Corylus avellana
Haze_08864 Corylus avellana
Hma1.2p1_0896F.1_g233940 Hydrangea macrophylla
Hma1.2p1_0896F.1_g233950 Hydrangea macrophylla
HPP92_015901 Vanilla planifolia
Hund18823 Selenicereus undatus
Lalb_Chr09g0321031 Lupinus albus
Lj2g0011086 Lotus japonicus
Lj8A232T63 Lonicera japonica
Lsat_1_v5_gn_3_7380 Lactuca sativa
Manes.02G022400 Manihot esculenta
Mapoly0022s0110 Marchantia polymorpha
MD14G1103600 Malus domestica
Medtr5g038850 Medicago truncatula
MELO3C005669.2 Cucumis melo
Migut.A00772 Erythranthe guttata
MSTRG.25602 Avicennia marina
Nitab4.5_0001215g0220 Nicotiana tabacum
Nitab4.5_0010794g0020 Nicotiana tabacum
Nn5g30495 Nelumbo nucifera
Os01g0764700 Oryza sativa ssp. japonica
Peaxi162Scf00198g00034 Petunia axillaris
PGR042G1084 Punica granatum
PGSC0003DMG400031232 Solanum tuberosum
Phvul.002G157400 Phaseolus vulgaris
Potri.001G104800 Populus trichocarpa
Pp3c24_17350 Physcomitrium patens
Prupe.5G098900 Prunus persica
Psat0s3411g0080 Pisum sativum
Psat2g182280 Pisum sativum
PSO541G1514 Papaver somniferum
PSO675G2933 Papaver somniferum
QL12p033263 Quercus lobata
QL12p033469 Quercus lobata
QL12p034065 Quercus lobata
QL12p034148 Quercus lobata
RcHm_v2.0_Chr7g0197851 Rosa chinensis
Rhsim02G0228600 Rhododendron simsii
Sabra01G0079500 Salix brachista
SalBow5G1266 Salvia bowleyana
Sc07g0009740 Simmondsia chinensis
Sed0019193 Sechium edule
SEGI_05186 Sequoiadendron giganteum
SGA_v2.0_scaffold253G45138 Striga asiatica
SGA_v2.0_scaffold96G28950 Striga asiatica
SHI07123 Sapria himalayana
Solyc10g074990.2 Solanum lycopersicum
Sopen10g027480 Solanum pennellii
Sp5g09430 Schrenkiella parvula
TAR625G0056 Trochodendron aralioides
THA.LOC104805035 Tarenaya hassleriana
Thecc.03G277700 Theobroma cacao
Thhalv10010768m.g Eutrema salsugineum
TPR.G38998 Trifolium pratense
TPR.G6698 Trifolium pratense
TWI38G1747 Tripterygium wilfordii
unitig_88.g27612 Utricularia gibba
vmacro11322 Vaccinium macrocarpon
VMungo1215G1017 Vigna mungo
Zm00001eb152210 Zea mays

User provided reference genes

Program Settings