Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p42440 Brassica napus
A05p27010 Brassica napus
Aa31LG8G8350 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2376 Anthoceros agrestis
Actinidia09705 Actinidia chinensis
Ah.09g228590 Amaranthus hybridus
AL3G35840 Arabidopsis lyrata
Aqoxy4G01979 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.TKPZ56 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X0NGMJ Arachis hypogaea
AT3G21720 Arabidopsis thaliana
ATR0697G058 Amborella trichopoda
ATR0697G137 Amborella trichopoda
ATR0697G164 Amborella trichopoda
Atru.chr6.3161 Acer truncatum
AUR62028388 Chenopodium quinoa
AUR62039771 Chenopodium quinoa
BcaB04g20563 Brassica carinata
BcaB04g20564 Brassica carinata
BcaB04g20565 Brassica carinata
BcaB04g20566 Brassica carinata
BcaB04g20567 Brassica carinata
BcaB04g20568 Brassica carinata
BcaB04g20569 Brassica carinata
BcaB06g26278 Brassica carinata
BcaC01g03487 Brassica carinata
BcaC05g28137 Brassica carinata
BolC1t04201H Brassica oleracea
BolC3t17478H Brassica oleracea
BolC5t32904H Brassica oleracea
BraA03t13397Z Brassica rapa
BraA05t21584Z Brassica rapa
C03p51920 Brassica napus
C05p41690 Brassica napus
CAN.G921.14 Capsicum annuum
CANSAT64G0826 Cannabis sativa
CARHR097670 Cardamine hirsuta
Carub.0003s2177 Capsella rubella
Ca_27733_v3 Cicer arietinum L.
CBR_g8290 Chara braunii
Cc05_g04940 Coffea canephora
CDE05G2280 Ceratophyllum demersum
CDE05G2484 Ceratophyllum demersum
CDE11G0460 Ceratophyllum demersum
CDE11G1033 Ceratophyllum demersum
Cfa014429 Carpinus fangiana
Cfa025720 Carpinus fangiana
Cfa027059 Carpinus fangiana
Ciclev10014655m.g Citrus clementina
CiPaw.03G162000 Carya illinoinensis
ClCG02G008490 Citrullus lanatus
COL.COLO4_27682 Corchorus olitorius
COL.COLO4_27683 Corchorus olitorius
Cpa.g.sc8.225 Carica papaya
Cre06.g282800 Chlamydomonas reinhardtii
CsaV3_2G035120 Cucumis sativus L.
CSS0029719 Camellia sinensis var. sinensis
CSS0044333 Camellia sinensis var. sinensis
DCAR_012950 Daucus carota
DCAR_019287 Daucus carota
DCAR_021183 Daucus carota
Dinv02740 Davidia involucrata
Dinv02741 Davidia involucrata
Dinv39693 Davidia involucrata
ECA233G0706 Erigeron canadensis
EL10Ac8g18891 Beta vulgaris
Eucgr.K00802 Eucalyptus grandis
FAN02G3012 Fragaria x ananassa
FAN05G5305 Fragaria x ananassa
FAN09G0477 Fragaria x ananassa
FAN14G1020 Fragaria x ananassa
FAN14G3935 Fragaria x ananassa
FvH4_6g43440 Fragaria vesca
Glyma.06G303200 Glycine max
Glyma.12G100500 Glycine max
Gohir.A03G109600 Gossypium hirsutum
Gohir.A13G093600 Gossypium hirsutum
Gohir.D02G134400 Gossypium hirsutum
Gohir.D13G087500 Gossypium hirsutum
Gorai.005G150300 Gossypium raimondii
Gorai.013G099800 Gossypium raimondii
GSVIVG01030608001 Vitis vinifera
HanXRQChr04g0110581 Helianthus annuus
Haze_12887 Corylus avellana
Haze_27171 Corylus avellana
HPP92_012326 Vanilla planifolia
HPP92_012387 Vanilla planifolia
HPP92_012388 Vanilla planifolia
HPP92_012389 Vanilla planifolia
HPP92_012390 Vanilla planifolia
Hund24408 Selenicereus undatus
Lalb_Chr03g0028811 Lupinus albus
Lalb_Chr03g0028821 Lupinus albus
Lalb_Chr19g0135731 Lupinus albus
Lj1P757T15 Lonicera japonica
Lj3g0018668 Lotus japonicus
Lsat_1_v5_gn_8_128420 Lactuca sativa
Manes.12G076000 Manihot esculenta
Manes.13G072200 Manihot esculenta
Mapoly0023s0108 Marchantia polymorpha
Mapoly0115s0061 Marchantia polymorpha
MBI02_g10107_MAGBIO Magnolia biondii
MD09G1106500 Malus domestica
MD17G1094300 Malus domestica
Medtr4g046757 Medicago truncatula
MELO3C019243.2 Cucumis melo
Migut.M00410 Erythranthe guttata
Nitab4.5_0001176g0080 Nicotiana tabacum
Nitab4.5_0003509g0010 Nicotiana tabacum
Nitab4.5_0010201g0030 Nicotiana tabacum
Nn1g03615 Nelumbo nucifera
Nn1g03620 Nelumbo nucifera
Nn1g07047 Nelumbo nucifera
Oeu011087.1 Olea europaea
Os07g0529000 Oryza sativa ssp. japonica
Peaxi162Scf00007g01115 Petunia axillaris
Peaxi162Scf00932g00022 Petunia axillaris
PGR142G3606 Punica granatum
PGSC0003DMG400025487 Solanum tuberosum
Phvul.011G105500 Phaseolus vulgaris
Phvul.011G106801 Phaseolus vulgaris
Potri.007G122900 Populus trichocarpa
Potri.017G036900 Populus trichocarpa
Pp3c7_2440 Physcomitrium patens
Pp3c7_2470 Physcomitrium patens
Prupe.3G219100 Prunus persica
Psat7g179960 Pisum sativum
PSO541G0248 Papaver somniferum
PSO675G8406 Papaver somniferum
QL08p033547 Quercus lobata
QL08p033580 Quercus lobata
RcHm_v2.0_Chr2g0159821 Rosa chinensis
Rhsim06G0159200 Rhododendron simsii
Sabra07G0099600 Salix brachista
SalBow7G1245 Salvia bowleyana
Sc06g0009530 Simmondsia chinensis
Sed0023583 Sechium edule
SEGI_12486 Sequoiadendron giganteum
SEGI_22707 Sequoiadendron giganteum
SGA_v2.0_scaffold34G13870 Striga asiatica
SMO196G0149 Selaginella moellendorffii
Sopen07g026110 Solanum pennellii
Sp3g19730 Schrenkiella parvula
TAR624G1207 Trochodendron aralioides
THA.LOC104808494 Tarenaya hassleriana
Thecc.02G312600 Theobroma cacao
Thhalv10022122m.g Eutrema salsugineum
TPR.G275 Trifolium pratense
TWI36G0780 Tripterygium wilfordii
TWI75G0012 Tripterygium wilfordii
unitig_899.g15245 Utricularia gibba
unitig_899.g15246 Utricularia gibba
vmacro12222 Vaccinium macrocarpon
VMungo1127G2299 Vigna mungo
Zm00001eb323090 Zea mays

User provided reference genes

Program Settings