Gene: AT3G21720

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G21720
  • Transcript Identifier AT3G21720.1
  • Gene Type Coding gene
  • Location Chr3 : 7652789-7655873 : negative

Gene Family Information

  • ID HOM05D004731
  • #Genes/#Species 155/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G21720.1
  • symbol ICL
  • uniprot P28297

Descriptions

  • Description isocitrate lyase
  • Computational description isocitrate lyase (ICL); FUNCTIONS IN: isocitrate lyase activity, catalytic activity; INVOLVED IN: carboxylic acid metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf whorl, seed, leaf; CONTAINS InterPro DOMAIN/s: Isocitrate lyase/phosphorylmutase, conserved site (InterPro:IPR018523), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Isocitrate lyase (InterPro:IPR006254), Isocitrate lyase/phosphorylmutase (InterPro:IPR000918); BEST Arabidopsis thaliana protein match is: Phosphoenolpyruvate carboxylase family protein (TAIR:AT1G77060.1); Has 9953 Blast hits to 7473 proteins in 1388 species: Archae - 150; Bacteria - 5572; Metazoa - 28; Fungi - 504; Plants - 171; Viruses - 0; Other Eukaryotes - 3528 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006099
IEA
GOA Databasetricarboxylic acid cycle
GO:0019752
IEA
GOA Databasecarboxylic acid metabolic process
GO:0019752
IEA
InterProcarboxylic acid metabolic process
GO:0006097
TAS, IEA
Gene Ontologyglyoxylate cycle1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0004451
IEA
GOA Databaseisocitrate lyase activity
GO:0004451
IBA
TAS
Gene Ontologyisocitrate lyase activity1 2
GO:0004451
IEA
InterProisocitrate lyase activity
GO:0016829
IEA
GOA Databaselyase activity
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005777
IEA
GOA Databaseperoxisome
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0009514
IEA
GOA Databaseglyoxysome
GO:0009514
IDA
IBA
Gene Ontologyglyoxysome2 3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006254 Isocitrate lyase
IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily
IPR039556 ICL/PEPM domain
IPR040442 Pyruvate kinase-like domain superfamily
Mapman id Description
5.7.3.6.3 Lipid metabolism.lipid degradation.fatty acid degradation.glyoxylate cycle.isocitrate lyase