Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p15190 Brassica napus
A10p10840 Brassica napus
Aa31LG3G9210 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.345 Anthoceros agrestis
Actinidia31859 Actinidia chinensis
Actinidia34185 Actinidia chinensis
Ah.07g206120 Amaranthus hybridus
AL8G28040 Arabidopsis lyrata
Aqoxy5G04028 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.A0EQPQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YXX8CM Arachis hypogaea
AT5G53330 Arabidopsis thaliana
ATR0661G055 Amborella trichopoda
Atru.chr1.287 Acer truncatum
AUR62021055 Chenopodium quinoa
AUR62031477 Chenopodium quinoa
BcaB08g35695 Brassica carinata
BcaC01g06246 Brassica carinata
BcaC04g20465 Brassica carinata
BcaNung06632 Brassica carinata
BcaNung07347 Brassica carinata
BolC3t14182H Brassica oleracea
BolC3t14188H Brassica oleracea
BolC9t57191H Brassica oleracea
BraA03t10813Z Brassica rapa
BraA10t43168Z Brassica rapa
C03p17720 Brassica napus
C03p17810 Brassica napus
C09p43180 Brassica napus
CAN.G108.16 Capsicum annuum
CAN.G204.6 Capsicum annuum
CANSAT21G2536 Cannabis sativa
CARHR266390 Cardamine hirsuta
Carub.0008s1351 Capsella rubella
Ca_16667_v3 Cicer arietinum L.
CBR_g83324 Chara braunii
CBR_g84869 Chara braunii
Cc02_g02010 Coffea canephora
CDE02G1124 Ceratophyllum demersum
CDE08G1019 Ceratophyllum demersum
CDE09G0250 Ceratophyllum demersum
Cfa016352 Carpinus fangiana
Ciclev10005830m.g Citrus clementina
CiPaw.06G006600 Carya illinoinensis
ClCG01G000680 Citrullus lanatus
COL.COLO4_08254 Corchorus olitorius
Cpa.g.sc3.37 Carica papaya
CsaV3_5G000780 Cucumis sativus L.
CSS0006896 Camellia sinensis var. sinensis
CSS0042605 Camellia sinensis var. sinensis
DCAR_020296 Daucus carota
Dinv28349 Davidia involucrata
Dinv35299 Davidia involucrata
Duzib068G0142 Durio zibethinus
Duzib084G0320 Durio zibethinus
Duzib205G0172 Durio zibethinus
EL10Ac3g05361 Beta vulgaris
Eucgr.A02672 Eucalyptus grandis
FAN01G1522 Fragaria x ananassa
FAN03G2418 Fragaria x ananassa
FAN06G1194 Fragaria x ananassa
FAN06G3132 Fragaria x ananassa
FAN06G4721 Fragaria x ananassa
FAN10G3127 Fragaria x ananassa
FAN16G3662 Fragaria x ananassa
FvH4_6g34200 Fragaria vesca
FvH4_7g16570 Fragaria vesca
FvH4_7g30890 Fragaria vesca
Glyma.04G239200 Glycine max
Glyma.06G124600 Glycine max
Gohir.A09G183300 Gossypium hirsutum
Gohir.A11G013800 Gossypium hirsutum
Gohir.D09G178000 Gossypium hirsutum
Gohir.D11G014000 Gossypium hirsutum
Gorai.006G200100 Gossypium raimondii
Gorai.007G014400 Gossypium raimondii
GSVIVG01028725001 Vitis vinifera
HanXRQChr07g0207131 Helianthus annuus
HanXRQChr14g0462731 Helianthus annuus
Haze_00101 Corylus avellana
Hma1.2p1_0142F.1_g064100 Hydrangea macrophylla
Hma1.2p1_0327F.1_g126670 Hydrangea macrophylla
Hma1.2p1_1891F.1_g306690 Hydrangea macrophylla
HPP92_008641 Vanilla planifolia
Hund30242 Selenicereus undatus
Hund30245 Selenicereus undatus
Lalb_Chr23g0271411 Lupinus albus
Lj1C1011G7 Lonicera japonica
Lj1g0014949 Lotus japonicus
Lsat_1_v5_gn_2_134381 Lactuca sativa
Manes.06G156000 Manihot esculenta
Manes.14G019414 Manihot esculenta
Mapoly0050s0076 Marchantia polymorpha
MBI06_g04286_MAGBIO Magnolia biondii
MCO03G325 Micromonas commoda
MD01G1213900 Malus domestica
MD07G1283600 Malus domestica
Medtr3g090640 Medicago truncatula
MELO3C005862.2 Cucumis melo
Migut.F00251 Erythranthe guttata
MSTRG.27052 Avicennia marina
MSTRG.8686 Avicennia marina
Nitab4.5_0000472g0190 Nicotiana tabacum
Nitab4.5_0001331g0150 Nicotiana tabacum
Nn1g01780 Nelumbo nucifera
Nn7g37372 Nelumbo nucifera
Oeu009271.1 Olea europaea
Oeu049096.1 Olea europaea
Os06g0160400 Oryza sativa ssp. japonica
Peaxi162Scf00618g00530 Petunia axillaris
Peaxi162Scf00904g00473 Petunia axillaris
PGR042G1451 Punica granatum
PGR142G1718 Punica granatum
PGR142G4196 Punica granatum
PGSC0003DMG400009067 Solanum tuberosum
PGSC0003DMG400028901 Solanum tuberosum
Phvul.008G159900 Phaseolus vulgaris
Phvul.009G136700 Phaseolus vulgaris
Potri.012G033300 Populus trichocarpa
Potri.015G023600 Populus trichocarpa
Pp3c1_11420 Physcomitrium patens
Prupe.2G306000 Prunus persica
Psat5g080520 Pisum sativum
PSO063G4149 Papaver somniferum
PSO170G2586 Papaver somniferum
QL09p011210 Quercus lobata
RcHm_v2.0_Chr1g0379961 Rosa chinensis
Rhsim09G0203300 Rhododendron simsii
SalBow4G0130 Salvia bowleyana
SalBow4G0254 Salvia bowleyana
Sc13g0009490 Simmondsia chinensis
Sed0016292 Sechium edule
Sed0024250 Sechium edule
SEGI_18632 Sequoiadendron giganteum
SGA_v2.0_scaffold192G40593 Striga asiatica
Solyc03g007520.3 Solanum lycopersicum
Solyc06g036500.1 Solanum lycopersicum
Sopen03g003480 Solanum pennellii
Sopen06g012490 Solanum pennellii
Sp6g15480 Schrenkiella parvula
TAR333G0005 Trochodendron aralioides
TAR374G0131 Trochodendron aralioides
THA.LOC104800282 Tarenaya hassleriana
THA.LOC104811935 Tarenaya hassleriana
Thecc.03G191400 Theobroma cacao
Thhalv10014603m.g Eutrema salsugineum
TPR.G33870 Trifolium pratense
TWI14G0874 Tripterygium wilfordii
TWI23G0029 Tripterygium wilfordii
TWI39G0409 Tripterygium wilfordii
unitig_747.g21854 Utricularia gibba
vmacro10099 Vaccinium macrocarpon
VMungo0647G2259 Vigna mungo
VMungo1309G2489 Vigna mungo
Zm00001eb376120 Zea mays

User provided reference genes

Program Settings