Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p18130 Brassica napus
A06p28290 Brassica napus
A07p22110 Brassica napus
Aa31LG4G18090 Aethionema arabicum
Actinidia03322 Actinidia chinensis
Actinidia25724 Actinidia chinensis
Ah.11g044230 Amaranthus hybridus
AL5G29440 Arabidopsis lyrata
AL8G22480 Arabidopsis lyrata
Aqoxy7G00911 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7TNR6F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N8XBBJ Arachis hypogaea
AT3G49600 Arabidopsis thaliana
ATR0006G074 Amborella trichopoda
Atru.chr12.843 Acer truncatum
AUR62020697 Chenopodium quinoa
AUR62028027 Chenopodium quinoa
BcaB01g00691 Brassica carinata
BcaB02g09597 Brassica carinata
BcaC01g02421 Brassica carinata
BcaC01g02422 Brassica carinata
BcaC07g39424 Brassica carinata
BolC3t18798H Brassica oleracea
BolC8t50076H Brassica oleracea
BraA06t24901Z Brassica rapa
BraA06t25772Z Brassica rapa
C03p65460 Brassica napus
C08p24600 Brassica napus
CAN.G30.25 Capsicum annuum
CANSAT25G2838 Cannabis sativa
CARHR158610 Cardamine hirsuta
CARHR158620 Cardamine hirsuta
Carub.0005s1593 Capsella rubella
Ca_12884_v3 Cicer arietinum L.
Ca_15681_v3 Cicer arietinum L.
CBR_g19585 Chara braunii
Cc07_g17410 Coffea canephora
CDE04G3074 Ceratophyllum demersum
CDE06G1884 Ceratophyllum demersum
Ciclev10007306m.g Citrus clementina
CiPaw.07G215000 Carya illinoinensis
ClCG08G012790 Citrullus lanatus
COL.COLO4_16463 Corchorus olitorius
COL.COLO4_18636 Corchorus olitorius
Cpa.g.sc42.62 Carica papaya
Cpa.g.sc42.63 Carica papaya
Cre01.g030450 Chlamydomonas reinhardtii
CsaV3_2G031540 Cucumis sativus L.
CSS0012298 Camellia sinensis var. sinensis
CSS0022336 Camellia sinensis var. sinensis
DCAR_000697 Daucus carota
Dinv09445 Davidia involucrata
Duzib168G2024 Durio zibethinus
ECA240G2491 Erigeron canadensis
EL10Ac2g03649 Beta vulgaris
Eucgr.E04340 Eucalyptus grandis
Eucgr.E04341 Eucalyptus grandis
FAN17G1117 Fragaria x ananassa
FAN27G1892 Fragaria x ananassa
FvH4_2g30650 Fragaria vesca
Glyma.04G074300 Glycine max
Glyma.06G075500 Glycine max
Glyma.14G132500 Glycine max
Glyma.17G201000 Glycine max
Gohir.A13G181900 Gossypium hirsutum
Gohir.D13G185401 Gossypium hirsutum
Gorai.013G211400 Gossypium raimondii
GSVIVG01035602001 Vitis vinifera
HanXRQChr03g0082331 Helianthus annuus
Haze_21689 Corylus avellana
Hma1.2p1_0147F.1_g065850 Hydrangea macrophylla
Hma1.2p1_0147F.1_g065870 Hydrangea macrophylla
Hma1.2p1_2965F.1_g330973 Hydrangea macrophylla
HPP92_023162 Vanilla planifolia
HPP92_023163 Vanilla planifolia
Hund19371 Selenicereus undatus
Lalb_Chr08g0243651 Lupinus albus
Lalb_Chr14g0362131 Lupinus albus
Lj5g0017014 Lotus japonicus
Lj7A755G38 Lonicera japonica
Lsat_1_v5_gn_5_59280 Lactuca sativa
Manes.18G079200 Manihot esculenta
Mapoly0015s0043 Marchantia polymorpha
MBI07_g41265_MAGBIO Magnolia biondii
MCO12G289 Micromonas commoda
MD08G1133600 Malus domestica
MD15G1110500 Malus domestica
Medtr1g010040 Medicago truncatula
Medtr3g108660 Medicago truncatula
MELO3C011203.2 Cucumis melo
Migut.H01115 Erythranthe guttata
MSTRG.2684 Avicennia marina
Nitab4.5_0000004g0240 Nicotiana tabacum
Nitab4.5_0000964g0050 Nicotiana tabacum
Nn8g40158 Nelumbo nucifera
Oeu047653.1 Olea europaea
Os03g0192800 Oryza sativa ssp. japonica
Os03g0192900 Oryza sativa ssp. japonica
Peaxi162Scf00583g00537 Petunia axillaris
PGR142G1098 Punica granatum
PGSC0003DMG401018450 Solanum tuberosum
PGSC0003DMG402018450 Solanum tuberosum
Phvul.001G057700 Phaseolus vulgaris
Phvul.009G100000 Phaseolus vulgaris
Potri.002G081600 Populus trichocarpa
Potri.005G179500 Populus trichocarpa
Pp3c16_5610 Physcomitrium patens
PRCOL_00003856 Prasinoderma coloniale
Prupe.1G462800 Prunus persica
Psat5g025880 Pisum sativum
Psat6g031760 Pisum sativum
PSO017G4020 Papaver somniferum
PSO063G2513 Papaver somniferum
PSO421G0298 Papaver somniferum
PSO541G2610 Papaver somniferum
PSO782G5635 Papaver somniferum
QL12p024639 Quercus lobata
RcHm_v2.0_Chr6g0312261 Rosa chinensis
RcHm_v2.0_Chr6g0312311 Rosa chinensis
Rhsim04G0220700 Rhododendron simsii
Sabra02G0063900 Salix brachista
Sc06g0001390 Simmondsia chinensis
Sed0007031 Sechium edule
Sed0011780 Sechium edule
SEGI_05067 Sequoiadendron giganteum
SEGI_25079 Sequoiadendron giganteum
SEGI_25158 Sequoiadendron giganteum
SEGI_37293 Sequoiadendron giganteum
SGA_v2.0_scaffold76G25169 Striga asiatica
SMO367G0705 Selaginella moellendorffii
Solyc03g078390.3 Solanum lycopersicum
Sopen03g021200 Solanum pennellii
Sp5g12510 Schrenkiella parvula
TAR624G0199 Trochodendron aralioides
THA.LOC104799000 Tarenaya hassleriana
Thecc.09G001900 Theobroma cacao
Thhalv10010085m.g Eutrema salsugineum
TPR.G1019 Trifolium pratense
TPR.G12016 Trifolium pratense
TPR.G12064 Trifolium pratense
TPR.G12432 Trifolium pratense
TPR.G21961 Trifolium pratense
TPR.G27547 Trifolium pratense
TPR.G35198 Trifolium pratense
TPR.G36582 Trifolium pratense
TWI32G0049 Tripterygium wilfordii
unitig_699.g19716 Utricularia gibba
unitig_699.g19717 Utricularia gibba
unitig_699.g19718 Utricularia gibba
vmacro12746 Vaccinium macrocarpon
vmacro12747 Vaccinium macrocarpon
VMungo0647G1764 Vigna mungo
VMungo1309G0968 Vigna mungo
Zm00001eb008340 Zea mays
Zm00001eb310400 Zea mays

User provided reference genes

Program Settings