Gene: Potri.002G081600

General Information

Structural Information

Species Populus trichocarpa
Gene Identifier Potri.002G081600
Transcript Identifier Potri.002G081600.1
Gene Type Coding gene
Location Chr02 : 5766992-5774171 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D004718
#Genes/#Species 155/96
Phylogenetic origin

ID ORTHO05D005838
#Genes/#Species 151/96
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id Potri.002G081600.v4.1
pacid 42777020
synonym Pt-UBP26.1

Descriptions

Short descriptions
Ortholog descriptions

Description K11858 - ubiquitin carboxyl-terminal hydrolase 48 [EC:3.4.19.12] (USP48)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016579	IEA	InterPro	protein deubiquitination
GO:0048316	ISO	PLAZA Integrative Orthology	seed development	AT3G49600

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0004197	IEA	InterPro	cysteine-type endopeptidase activity
GO:0004843	IEA	InterPro	thiol-dependent deubiquitinase

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005730	ISO	PLAZA Integrative Orthology	nucleolus	AT3G49600

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR035927	DUSP-like superfamily
IPR044743	Ubiquitin-specific-processing protease 48, Ubl domain
IPR001394	Peptidase C19, ubiquitin carboxyl-terminal hydrolase
IPR006615	Peptidase C19, ubiquitin-specific peptidase, DUSP domain
IPR033841	Ubiquitin-specific peptidase 48
IPR038765	Papain-like cysteine peptidase superfamily
IPR029071	Ubiquitin-like domain superfamily

Mapman id	Description
19.2.3.1.1.11	Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.ubiquitin deconjugation.UBP deubiquitinase activities.deubiquitinase (UBP26)