Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p03660 Brassica napus
A10p28500 Brassica napus
Aa31LG3G18370 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2364 Anthoceros agrestis
Actinidia01418 Actinidia chinensis
Actinidia10430 Actinidia chinensis
Ah.02g120970 Amaranthus hybridus
Ah.11g047310 Amaranthus hybridus
AL6G18560 Arabidopsis lyrata
Aqoxy3G00609 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.51KNRK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5N8491 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6286TX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F96WR3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RJWR3V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U185V9 Arachis hypogaea
AT5G08170 Arabidopsis thaliana
ATR0691G179 Amborella trichopoda
Atru.chr9.678 Acer truncatum
AUR62032158 Chenopodium quinoa
AUR62036914 Chenopodium quinoa
BcaB01g05624 Brassica carinata
BcaB08g37277 Brassica carinata
BcaC05g25434 Brassica carinata
BcaNung05091 Brassica carinata
BolC3t12946H Brassica oleracea
BolC9t59625H Brassica oleracea
BraA01t02993Z Brassica rapa
BraA03t09714Z Brassica rapa
BraA09t36800Z Brassica rapa
BraA10t44898Z Brassica rapa
C03p04140 Brassica napus
C05p13090 Brassica napus
C09p68780 Brassica napus
CAN.G471.4 Capsicum annuum
CANSAT80G0730 Cannabis sativa
CARHR205010 Cardamine hirsuta
Carub.0006s0707 Capsella rubella
Ca_21742_v3 Cicer arietinum L.
Ca_25716_v3 Cicer arietinum L.
CBR_g22406 Chara braunii
Cc04_g07930 Coffea canephora
CDE06G1750 Ceratophyllum demersum
CDE06G1955 Ceratophyllum demersum
CDE07G1308 Ceratophyllum demersum
CDE07G1693 Ceratophyllum demersum
Cfa019856 Carpinus fangiana
Ciclev10020592m.g Citrus clementina
CiPaw.15G118000 Carya illinoinensis
ClCG06G015290 Citrullus lanatus
Cpa.g.c37318 Carica papaya
Cpa.g.c37454 Carica papaya
Cpa.g.c45305 Carica papaya
Cpa.g.c47417 Carica papaya
Cre01.g009350 Chlamydomonas reinhardtii
Cre01.g053300 Chlamydomonas reinhardtii
CsaV3_1G003170 Cucumis sativus L.
CSS0001909 Camellia sinensis var. sinensis
CSS0018290 Camellia sinensis var. sinensis
CSS0021853 Camellia sinensis var. sinensis
CSS0026593 Camellia sinensis var. sinensis
CSS0041488 Camellia sinensis var. sinensis
CSS0041638 Camellia sinensis var. sinensis
CSS0048768 Camellia sinensis var. sinensis
DCAR_015115 Daucus carota
DCAR_015116 Daucus carota
Dinv36841 Davidia involucrata
Duzib205G0043 Durio zibethinus
ECA232G0381 Erigeron canadensis
ECA247G3683 Erigeron canadensis
EL10Ac5g11213 Beta vulgaris
Eucgr.B00659 Eucalyptus grandis
FAN04G1239 Fragaria x ananassa
FAN08G1512 Fragaria x ananassa
FAN13G2141 Fragaria x ananassa
FAN18G3467 Fragaria x ananassa
FvH4_5g13050 Fragaria vesca
Glyma.17G083400 Glycine max
Gohir.A07G057600 Gossypium hirsutum
Gohir.D07G062400 Gossypium hirsutum
Gorai.001G065900 Gossypium raimondii
GSVIVG01008185001 Vitis vinifera
HanXRQChr16g0501981 Helianthus annuus
HanXRQChr16g0501991 Helianthus annuus
Haze_18550 Corylus avellana
Hma1.2p1_0744F.1_g211680 Hydrangea macrophylla
HPP92_019130 Vanilla planifolia
HPP92_019140 Vanilla planifolia
Hund09942 Selenicereus undatus
Hund09975 Selenicereus undatus
Hund10163 Selenicereus undatus
Lalb_Chr13g0302611 Lupinus albus
Lj4g0008523 Lotus japonicus
Lj5A139T82 Lonicera japonica
Lsat_1_v5_gn_3_89601 Lactuca sativa
Lsat_1_v5_gn_4_112840 Lactuca sativa
Lsat_1_v5_gn_5_119361 Lactuca sativa
Manes.01G023900 Manihot esculenta
Mapoly0016s0188 Marchantia polymorpha
MBI14_g16236_MAGBIO Magnolia biondii
MCO01G769 Micromonas commoda
MD06G1207500 Malus domestica
MD14G1218000 Malus domestica
Medtr4g110140 Medicago truncatula
Medtr4g112810 Medicago truncatula
MELO3C017264.2 Cucumis melo
Migut.J01255 Erythranthe guttata
MSTRG.22946 Avicennia marina
Nitab4.5_0000208g0050 Nicotiana tabacum
Nitab4.5_0007617g0010 Nicotiana tabacum
Nn4g23609 Nelumbo nucifera
Oeu058039.1 Olea europaea
Os04g0466600 Oryza sativa ssp. japonica
Peaxi162Scf00119g00017 Petunia axillaris
PGR083G2684 Punica granatum
PGSC0003DMG400000653 Solanum tuberosum
Phvul.003G180900 Phaseolus vulgaris
Potri.015G055300 Populus trichocarpa
Pp3c13_22750 Physcomitrium patens
Pp3c14_21790 Physcomitrium patens
PRCOL_00005028 Prasinoderma coloniale
Prupe.5G211900 Prunus persica
Psat4g044040 Pisum sativum
PSO017G3616 Papaver somniferum
PSO478G1466 Papaver somniferum
QL10p021731 Quercus lobata
QL10p021836 Quercus lobata
RcHm_v2.0_Chr2g0128461 Rosa chinensis
RcHm_v2.0_Chr2g0129061 Rosa chinensis
RcHm_v2.0_Chr2g0164691 Rosa chinensis
RcHm_v2.0_Chr4g0407261 Rosa chinensis
RcHm_v2.0_Chr4g0407271 Rosa chinensis
RcHm_v2.0_Chr7g0184081 Rosa chinensis
Rhsim08G0150000 Rhododendron simsii
Sabra15G0080100 Salix brachista
SalBow5G2075 Salvia bowleyana
Sc12g0006960 Simmondsia chinensis
Sc12g0006990 Simmondsia chinensis
Sed0023319 Sechium edule
SGA_v2.0_scaffold26G11385 Striga asiatica
SGA_v2.0_scaffold56G20037 Striga asiatica
SHI18993 Sapria himalayana
SMO115G0272 Selaginella moellendorffii
Solyc12g038970.3 Solanum lycopersicum
Sopen12g019180 Solanum pennellii
Sp6g34780 Schrenkiella parvula
TAR374G0590 Trochodendron aralioides
THA.LOC104819389 Tarenaya hassleriana
Thecc.03G112800 Theobroma cacao
Thhalv10013807m.g Eutrema salsugineum
TPR.G2028 Trifolium pratense
TWI81G0688 Tripterygium wilfordii
unitig_26.g9673 Utricularia gibba
vmacro17655 Vaccinium macrocarpon
VMungo1215G1525 Vigna mungo
Zm00001eb424480 Zea mays

User provided reference genes

Program Settings