Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p26740 Brassica napus
Aa31LG3G16190 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1068 Anthoceros agrestis
Actinidia10366 Actinidia chinensis
Actinidia25390 Actinidia chinensis
Actinidia30809 Actinidia chinensis
Ah.05g170630 Amaranthus hybridus
AL6G21500 Arabidopsis lyrata
Aqoxy5G01331 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.438KDZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B7HYSM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D85VJY Arachis hypogaea
AT5G10940 Arabidopsis thaliana
ATR0022G033 Amborella trichopoda
ATR0022G055 Amborella trichopoda
ATR0022G061 Amborella trichopoda
Atru.chr13.1049 Acer truncatum
Atru.chr13.1050 Acer truncatum
AUR62019009 Chenopodium quinoa
AUR62027850 Chenopodium quinoa
BcaC04g19274 Brassica carinata
BolC3t13061H Brassica oleracea
BolC9t59411H Brassica oleracea
BraA10t44730Z Brassica rapa
C03p05510 Brassica napus
C09p65890 Brassica napus
CANSAT25G3216 Cannabis sativa
CARHR202350 Cardamine hirsuta
Carub.0006s0943 Capsella rubella
Ca_15986_v3 Cicer arietinum L.
CBR_g8449 Chara braunii
Cc10_g15560 Coffea canephora
Cc10_g15570 Coffea canephora
CDE10G0295 Ceratophyllum demersum
CDE10G1141 Ceratophyllum demersum
Cfa013702 Carpinus fangiana
Ciclev10000370m.g Citrus clementina
CiPaw.08G054000 Carya illinoinensis
COL.COLO4_11469 Corchorus olitorius
COL.COLO4_35194 Corchorus olitorius
Cpa.g.sc608.2 Carica papaya
Cre07.g349500 Chlamydomonas reinhardtii
Cre10.g425050 Chlamydomonas reinhardtii
CsaV3_3G047860 Cucumis sativus L.
CSS0032958 Camellia sinensis var. sinensis
DCAR_012867 Daucus carota
Duzib041G0224 Durio zibethinus
Duzib093G2117 Durio zibethinus
ECA247G4144 Erigeron canadensis
EL10Ac1g01103 Beta vulgaris
Eucgr.F02126 Eucalyptus grandis
FAN04G0711 Fragaria x ananassa
FAN08G3395 Fragaria x ananassa
FAN13G1835 Fragaria x ananassa
FAN18G2343 Fragaria x ananassa
FvH4_5g35830 Fragaria vesca
Glyma.04G093100 Glycine max
Glyma.06G094900 Glycine max
Gohir.A05G221400 Gossypium hirsutum
Gohir.A06G032640 Gossypium hirsutum
Gohir.D05G224100 Gossypium hirsutum
Gohir.D06G032700 Gossypium hirsutum
Gohir.D08G147200 Gossypium hirsutum
Gorai.002G010500 Gossypium raimondii
Gorai.009G231600 Gossypium raimondii
Gorai.010G036000 Gossypium raimondii
GSVIVG01009135001 Vitis vinifera
HanXRQChr02g0047021 Helianthus annuus
Haze_22346 Corylus avellana
HPP92_009251 Vanilla planifolia
HPP92_009252 Vanilla planifolia
HPP92_009255 Vanilla planifolia
HPP92_009332 Vanilla planifolia
Hund27004 Selenicereus undatus
Lalb_Chr23g0270111 Lupinus albus
Lj1g0004448 Lotus japonicus
Lj4A732G49 Lonicera japonica
Lsat_1_v5_gn_1_2220 Lactuca sativa
Lsat_1_v5_gn_3_108701 Lactuca sativa
Lsat_1_v5_gn_5_92401 Lactuca sativa
Lsat_1_v5_gn_7_50581 Lactuca sativa
Lsat_1_v5_gn_9_109720 Lactuca sativa
Lsat_1_v5_gn_9_44400 Lactuca sativa
Manes.02G147000 Manihot esculenta
Mapoly0005s0266 Marchantia polymorpha
MBI04_g06620_MAGBIO Magnolia biondii
MBI06_g18796_MAGBIO Magnolia biondii
MBI06_g42714_MAGBIO Magnolia biondii
MBI08_g18173_MAGBIO Magnolia biondii
MBI10_g00404_MAGBIO Magnolia biondii
MBI11_g09986_MAGBIO Magnolia biondii
MBI11_g17728_MAGBIO Magnolia biondii
MBI13_g01675_MAGBIO Magnolia biondii
MBI14_g30585_MAGBIO Magnolia biondii
MBI16_g17111_MAGBIO Magnolia biondii
MBI16_g46012_MAGBIO Magnolia biondii
MBI18_g04909_MAGBIO Magnolia biondii
MD08G1192800 Malus domestica
MD15G1381500 Malus domestica
Medtr1338s0010 Medicago truncatula
Medtr3g100690 Medicago truncatula
MELO3C003537.2 Cucumis melo
Migut.N02866 Erythranthe guttata
MSTRG.22174 Avicennia marina
Nitab4.5_0001507g0080 Nicotiana tabacum
Nitab4.5_0005723g0010 Nicotiana tabacum
Nitab4.5_0006922g0020 Nicotiana tabacum
Nn047s41911 Nelumbo nucifera
Nn5g29943 Nelumbo nucifera
Oeu016837.1 Olea europaea
Os03g0187300 Oryza sativa ssp. japonica
Peaxi162Scf00281g00711 Petunia axillaris
PGR042G3759 Punica granatum
Phvul.008G143100 Phaseolus vulgaris
Phvul.009G038100 Phaseolus vulgaris
Phvul.010G090900 Phaseolus vulgaris
Potri.002G103066 Populus trichocarpa
Potri.002G103132 Populus trichocarpa
Potri.002G103216 Populus trichocarpa
Potri.005G158300 Populus trichocarpa
Pp3c15_6410 Physcomitrium patens
Prupe.1G527400 Prunus persica
Psat5g045560 Pisum sativum
PSO210G1320 Papaver somniferum
QL09p017125 Quercus lobata
RcHm_v2.0_Chr7g0237521 Rosa chinensis
Rhsim06G0074200 Rhododendron simsii
Sabra02G0080900 Salix brachista
SalBow2G1697 Salvia bowleyana
Sc26g0000230 Simmondsia chinensis
Sed0012148 Sechium edule
Sed0023876 Sechium edule
SEGI_03893 Sequoiadendron giganteum
SEGI_24481 Sequoiadendron giganteum
SGA_v2.0_scaffold84G26469 Striga asiatica
SHI23737 Sapria himalayana
SHI23738 Sapria himalayana
SMO361G0338 Selaginella moellendorffii
Solyc04g076020.3 Solanum lycopersicum
Sopen04g029970 Solanum pennellii
Sp6g32550 Schrenkiella parvula
TAR376G0508 Trochodendron aralioides
TAR628G0590 Trochodendron aralioides
THA.LOC104799016 Tarenaya hassleriana
THA.LOC104814992 Tarenaya hassleriana
Thecc.08G067600 Theobroma cacao
Thhalv10012761m.g Eutrema salsugineum
TPR.G26024 Trifolium pratense
TWI12G0736 Tripterygium wilfordii
TWI56G1288 Tripterygium wilfordii
unitig_21.g20611 Utricularia gibba
unitig_21.g20612 Utricularia gibba
vmacro21311 Vaccinium macrocarpon
VMungo1309G0150 Vigna mungo
Zm00001eb006570 Zea mays
Zm00001eb401530 Zea mays

User provided reference genes

Program Settings