Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p16150 Brassica napus
A09p58230 Brassica napus
Aa31LG3G140 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.318 Anthoceros agrestis
Actinidia02388 Actinidia chinensis
Actinidia11749 Actinidia chinensis
Actinidia11750 Actinidia chinensis
Actinidia11754 Actinidia chinensis
AL4G10620 Arabidopsis lyrata
Aqoxy4G02770 Aquilegia oxysepala
Aqoxy5G01524 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.EM89X0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JDK4IY Arachis hypogaea
AT2G21440 Arabidopsis thaliana
ATR0564G425 Amborella trichopoda
Atru.chr5.3088 Acer truncatum
AUR62002225 Chenopodium quinoa
AUR62015438 Chenopodium quinoa
BcaC02g08790 Brassica carinata
BcaC02g08791 Brassica carinata
BcaC07g41146 Brassica carinata
BolC4t26659H Brassica oleracea
BolC8t51714H Brassica oleracea
BraA04t17255Z Brassica rapa
BraA09t41211Z Brassica rapa
C04p50630 Brassica napus
C08p41530 Brassica napus
CAN.G1597.5 Capsicum annuum
CAN.G834.10 Capsicum annuum
CAN.G98.11 Capsicum annuum
CANSAT11G1974 Cannabis sativa
CARHR112350 Cardamine hirsuta
Carub.0004s0049 Capsella rubella
Ca_23900_v3 Cicer arietinum L.
CBR_g29474 Chara braunii
Cc02_g17180 Coffea canephora
CDE02G0935 Ceratophyllum demersum
Cfa005063 Carpinus fangiana
Cfa023221 Carpinus fangiana
Ciclev10027768m.g Citrus clementina
CiPaw.06G132000 Carya illinoinensis
ClCG02G004760 Citrullus lanatus
COL.COLO4_26000 Corchorus olitorius
COL.COLO4_26001 Corchorus olitorius
Cpa.g.sc150.59 Carica papaya
Cre02.g104650 Chlamydomonas reinhardtii
CsaV3_7G000160 Cucumis sativus L.
CSS0049841 Camellia sinensis var. sinensis
DCAR_023026 Daucus carota
Dinv42031 Davidia involucrata
ECA236G4812 Erigeron canadensis
EL10Ac3g05863 Beta vulgaris
Eucgr.I01295 Eucalyptus grandis
FAN01G1267 Fragaria x ananassa
FAN03G0917 Fragaria x ananassa
FAN06G0733 Fragaria x ananassa
FAN10G1169 Fragaria x ananassa
FAN10G1385 Fragaria x ananassa
FAN10G4111 Fragaria x ananassa
FAN15G0405 Fragaria x ananassa
FAN20G2064 Fragaria x ananassa
FAN24G0050 Fragaria x ananassa
FAN27G3342 Fragaria x ananassa
FvH4_2g09800 Fragaria vesca
FvH4_3g27511 Fragaria vesca
FvH4_7g06401 Fragaria vesca
FvH4_7g06402 Fragaria vesca
FvH4_7g06403 Fragaria vesca
FvH4_7g12280 Fragaria vesca
Glyma.12G236300 Glycine max
Glyma.13G201700 Glycine max
Gohir.A03G197200 Gossypium hirsutum
Gohir.A13G019000 Gossypium hirsutum
Gohir.D02G218533 Gossypium hirsutum
Gohir.D02G218566 Gossypium hirsutum
Gohir.D13G029900 Gossypium hirsutum
Gorai.013G034200 Gossypium raimondii
GSVIVG01024222001 Vitis vinifera
HanXRQChr16g0505091 Helianthus annuus
Haze_02320 Corylus avellana
HPP92_025377 Vanilla planifolia
HPP92_025379 Vanilla planifolia
HPP92_025472 Vanilla planifolia
Hund11840 Selenicereus undatus
Lalb_Chr03g0034141 Lupinus albus
Lalb_Chr19g0132251 Lupinus albus
Lj1g0020880 Lotus japonicus
Lj5C193G19 Lonicera japonica
Lsat_1_v5_gn_6_14381 Lactuca sativa
Lsat_1_v5_gn_7_91680 Lactuca sativa
Manes.04G086301 Manihot esculenta
Mapoly0009s0044 Marchantia polymorpha
MBI03_g33031_MAGBIO Magnolia biondii
MD05G1059700 Malus domestica
MD10G1067900 Malus domestica
Medtr1g080390 Medicago truncatula
MELO3C013443.2 Cucumis melo
Migut.G00750 Erythranthe guttata
MSTRG.5411 Avicennia marina
Nitab4.5_0003234g0030 Nicotiana tabacum
Nitab4.5_0009512g0020 Nicotiana tabacum
Nn5g29730 Nelumbo nucifera
Oeu005820.1 Olea europaea
Oeu038840.1 Olea europaea
Oeu045064.1 Olea europaea
Oeu050697.1 Olea europaea
Os03g0801800 Oryza sativa ssp. japonica
Os03g0824300 Oryza sativa ssp. japonica
Peaxi162Scf00016g00358 Petunia axillaris
PGR142G2793 Punica granatum
PGSC0003DMG400030953 Solanum tuberosum
Phvul.011G210900 Phaseolus vulgaris
Potri.009G120900 Populus trichocarpa
Pp3c11_7560 Physcomitrium patens
PRCOL_00006869 Prasinoderma coloniale
Prupe.8G085300 Prunus persica
Prupe.8G089600 Prunus persica
Prupe.8G089700 Prunus persica
Prupe.8G095100 Prunus persica
Psat2g040720 Pisum sativum
PSO170G5257 Papaver somniferum
PSO541G1340 Papaver somniferum
PSO675G4364 Papaver somniferum
QL11p045374 Quercus lobata
RcHm_v2.0_Chr6g0266121 Rosa chinensis
Rhsim11G0181000 Rhododendron simsii
Sabra04G0106700 Salix brachista
Sabra09G0093300 Salix brachista
SalBow3G4209 Salvia bowleyana
Sc08g0000680 Simmondsia chinensis
Sed0015033 Sechium edule
SEGI_17742 Sequoiadendron giganteum
SEGI_24468 Sequoiadendron giganteum
SGA_v2.0_scaffold122G33210 Striga asiatica
SGA_v2.0_scaffold4257G54456 Striga asiatica
SHI01140 Sapria himalayana
SMO203G0028 Selaginella moellendorffii
SMO203G0232 Selaginella moellendorffii
SMO357G0006 Selaginella moellendorffii
SMO357G0010 Selaginella moellendorffii
Solyc01g109990.4 Solanum lycopersicum
Sopen01g052180 Solanum pennellii
Sp4g00610 Schrenkiella parvula
TAR633G2180 Trochodendron aralioides
THA.LOC104806024 Tarenaya hassleriana
THA.LOC104824808 Tarenaya hassleriana
THA.LOC104824809 Tarenaya hassleriana
Thecc.02G079400 Theobroma cacao
Thhalv10023293m.g Eutrema salsugineum
TPR.G23542 Trifolium pratense
TPR.G23556 Trifolium pratense
TPR.G3476 Trifolium pratense
TWI75G0911 Tripterygium wilfordii
vmacro02074 Vaccinium macrocarpon
VMungo1127G0931 Vigna mungo
Zm00001eb212720 Zea mays

User provided reference genes

Program Settings