Gene: Sopen01g052180

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g052180
  • Transcript Identifier Sopen01g052180.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 107647327-107659021 : positive

Gene Family Information

  • ID HOM05D004650
  • #Genes/#Species 156/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g052180.1

Descriptions

  • Description RNA-binding (RRM/RBD/RNP motifs) family protein | FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: SC35-like splicing factor 28
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035979 RNA-binding domain superfamily
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR000504 RNA recognition motif domain
Mapman id Description
17.1.2.2.1.2 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.pre-60S ribosomal subunit nuclear assembly.assembly factor (NOP4)