Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p39940 Brassica napus
A09p06280 Brassica napus
Aa31LG11G4400 Aethionema arabicum
Actinidia09762 Actinidia chinensis
Actinidia10511 Actinidia chinensis
Actinidia10512 Actinidia chinensis
Actinidia13189 Actinidia chinensis
Actinidia22297 Actinidia chinensis
Actinidia36729 Actinidia chinensis
Ah.05g177560 Amaranthus hybridus
AL6G36810 Arabidopsis lyrata
Aqoxy7G03810 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.21LKMJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8PBG0P Arachis hypogaea
AT5G25150 Arabidopsis thaliana
ATR0739G094 Amborella trichopoda
Atru.chr7.2537 Acer truncatum
AUR62013801 Chenopodium quinoa
AUR62023356 Chenopodium quinoa
BcaB04g19812 Brassica carinata
BcaB07g29936 Brassica carinata
BcaC03g17924 Brassica carinata
BcaC04g23574 Brassica carinata
BolC2t12041H Brassica oleracea
BolC9t53613H Brassica oleracea
BraA02t08956Z Brassica rapa
BraA09t36273Z Brassica rapa
C02p59830 Brassica napus
C09p06950 Brassica napus
CAN.G199.61 Capsicum annuum
CARHR188340 Cardamine hirsuta
Carub.0006s2297 Capsella rubella
Ca_15774_v3 Cicer arietinum L.
CBR_g39739 Chara braunii
CBR_g41144 Chara braunii
Cc09_g08590 Coffea canephora
CDE05G1210 Ceratophyllum demersum
CDE05G3172 Ceratophyllum demersum
CDE05G3472 Ceratophyllum demersum
CDE05G3588 Ceratophyllum demersum
Cfa022837 Carpinus fangiana
Cfa024184 Carpinus fangiana
Ciclev10007613m.g Citrus clementina
CiPaw.07G229300 Carya illinoinensis
ClCG05G016370 Citrullus lanatus
COL.COLO4_18941 Corchorus olitorius
Cpa.g.sc127.22 Carica papaya
Cre12.g526950 Chlamydomonas reinhardtii
CsaV3_4G036640 Cucumis sativus L.
CSS0008139 Camellia sinensis var. sinensis
CSS0042581 Camellia sinensis var. sinensis
CSS0046974 Camellia sinensis var. sinensis
DCAR_015265 Daucus carota
Dinv34967 Davidia involucrata
Dinv40325 Davidia involucrata
Dinv40981 Davidia involucrata
Duzib168G2284 Durio zibethinus
ECA240G3507 Erigeron canadensis
EL10Ac1g00704 Beta vulgaris
Eucgr.C02661 Eucalyptus grandis
FAN15G3250 Fragaria x ananassa
FAN20G0152 Fragaria x ananassa
FAN20G1191 Fragaria x ananassa
FAN27G1200 Fragaria x ananassa
FvH4_2g41020 Fragaria vesca
Glyma.04G061600 Glycine max
Glyma.06G062300 Glycine max
Glyma.14G103500 Glycine max
Glyma.14G103600 Glycine max
Glyma.17G222200 Glycine max
Gohir.A05G058900 Gossypium hirsutum
Gohir.A07G031900 Gossypium hirsutum
Gohir.D05G060932 Gossypium hirsutum
Gohir.D07G035600 Gossypium hirsutum
Gorai.001G037500 Gossypium raimondii
GSVIVG01035887001 Vitis vinifera
HanXRQChr03g0084861 Helianthus annuus
Haze_21427 Corylus avellana
Haze_26425 Corylus avellana
Hma1.2p1_0059F.1_g032640 Hydrangea macrophylla
HPP92_014401 Vanilla planifolia
Hund27424 Selenicereus undatus
Lalb_Chr23g0268241 Lupinus albus
Lj1g0022186 Lotus japonicus
Lj7A732T26 Lonicera japonica
Lsat_1_v5_gn_6_77900 Lactuca sativa
Lsat_1_v5_gn_7_4261 Lactuca sativa
Manes.03G009801 Manihot esculenta
Manes.16G128700 Manihot esculenta
Mapoly0009s0169 Marchantia polymorpha
MBI15_g05236_MAGBIO Magnolia biondii
MCO11G293 Micromonas commoda
MCO11G306 Micromonas commoda
MD00G1143300 Malus domestica
MD15G1038900 Malus domestica
MD15G1039000 Malus domestica
MD15G1039100 Malus domestica
Medtr3g106080 Medicago truncatula
MELO3C016968.2 Cucumis melo
Migut.N00603 Erythranthe guttata
MSTRG.4644 Avicennia marina
MSTRG.9370 Avicennia marina
Nitab4.5_0003976g0020 Nicotiana tabacum
Nitab4.5_0007182g0050 Nicotiana tabacum
Nn8g39852 Nelumbo nucifera
Oeu013659.1 Olea europaea
Oeu061252.3 Olea europaea
Os06g0649500 Oryza sativa ssp. japonica
Os07g0205200 Oryza sativa ssp. japonica
Os10g0580750 Oryza sativa ssp. japonica
Peaxi162Scf00430g00519 Petunia axillaris
PGR042G1415 Punica granatum
Phvul.001G042300 Phaseolus vulgaris
Phvul.009G087600 Phaseolus vulgaris
Potri.006G263400 Populus trichocarpa
Potri.018G020200 Populus trichocarpa
Pp3c12_23330 Physcomitrium patens
PRCOL_00000651 Prasinoderma coloniale
Prupe.1G392800 Prunus persica
Psat5g032640 Pisum sativum
PSO063G4867 Papaver somniferum
PSO541G0014 Papaver somniferum
PSO782G2171 Papaver somniferum
RcHm_v2.0_Chr6g0299541 Rosa chinensis
RcHm_v2.0_Chr7g0214461 Rosa chinensis
Rhsim02G0214000 Rhododendron simsii
Sabra06G0205900 Salix brachista
Sabra18G0022500 Salix brachista
SalBow1G2567 Salvia bowleyana
Sed0004025 Sechium edule
Sed0017212 Sechium edule
SEGI_13945 Sequoiadendron giganteum
SEGI_21073 Sequoiadendron giganteum
SEGI_28232 Sequoiadendron giganteum
SEGI_29407 Sequoiadendron giganteum
SEGI_30848 Sequoiadendron giganteum
SGA_v2.0_scaffold40G15680 Striga asiatica
SMO118G0104 Selaginella moellendorffii
Solyc06g065700.3 Solanum lycopersicum
Sopen06g024220 Solanum pennellii
Sp2g22380 Schrenkiella parvula
TAR625G0176 Trochodendron aralioides
TAR626G1191 Trochodendron aralioides
TAR648G0003 Trochodendron aralioides
THA.LOC104814991 Tarenaya hassleriana
Thecc.09G016800 Theobroma cacao
Thhalv10003767m.g Eutrema salsugineum
TPR.G1835 Trifolium pratense
TWI32G0830 Tripterygium wilfordii
TWI63G0978 Tripterygium wilfordii
vmacro11252 Vaccinium macrocarpon
VMungo0647G2075 Vigna mungo
VMungo1309G0882 Vigna mungo
VMungo1309G1582 Vigna mungo
Zm00001eb239900 Zea mays
Zm00001eb259920 Zea mays
Zm00001eb388650 Zea mays

User provided reference genes

Program Settings