Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p33240 Brassica napus
A02p33250 Brassica napus
A02p33260 Brassica napus
A09p24110 Brassica napus
Aa31LG2G7300 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.1878 Anthoceros agrestis
Actinidia04098 Actinidia chinensis
Actinidia04099 Actinidia chinensis
Actinidia11790 Actinidia chinensis
Ah.13g075020 Amaranthus hybridus
AL5G12800 Arabidopsis lyrata
Aqoxy3G03454 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8R27D6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KB2NSX Arachis hypogaea
AT2G03150 Arabidopsis thaliana
ATR0564G229 Amborella trichopoda
Atru.chr11.1748 Acer truncatum
Atru.chr11.1749 Acer truncatum
Atru.chr11.1750 Acer truncatum
AUR62035342 Chenopodium quinoa
AUR62035898 Chenopodium quinoa
AUR62041987 Chenopodium quinoa
BcaB05g23630 Brassica carinata
BcaB07g30683 Brassica carinata
BcaB07g33689 Brassica carinata
BcaC03g17185 Brassica carinata
BcaC04g21505 Brassica carinata
BolC2t11204H Brassica oleracea
BolC9t55959H Brassica oleracea
BraA02t08348Z Brassica rapa
BraA09t38011Z Brassica rapa
C02p51140 Brassica napus
C09p31000 Brassica napus
CAN.G194.5 Capsicum annuum
CANSAT64G0453 Cannabis sativa
CARHR145490 Cardamine hirsuta
Carub.0005s0198 Capsella rubella
Ca_04825_v3 Cicer arietinum L.
CBR_g37529 Chara braunii
CBR_g5747 Chara braunii
CBR_g5749 Chara braunii
CBR_g6555 Chara braunii
Cc00_g08470 Coffea canephora
CDE04G0114 Ceratophyllum demersum
CDE07G1889 Ceratophyllum demersum
Cfa008959 Carpinus fangiana
Ciclev10030522m.g Citrus clementina
CiPaw.05G132100 Carya illinoinensis
CiPaw.06G087400 Carya illinoinensis
ClCG09G021930 Citrullus lanatus
Cpa.g.sc25.130 Carica papaya
Cre06.g283634 Chlamydomonas reinhardtii
CsaV3_5G025180 Cucumis sativus L.
DCAR_013185 Daucus carota
Dinv02961 Davidia involucrata
Duzib248G1210 Durio zibethinus
ECA233G5935 Erigeron canadensis
ECA246G2651 Erigeron canadensis
EL10Ac3g06731 Beta vulgaris
Eucgr.G02485 Eucalyptus grandis
FAN07G2218 Fragaria x ananassa
FAN12G0764 Fragaria x ananassa
FAN17G1193 Fragaria x ananassa
FAN22G0563 Fragaria x ananassa
FvH4_4g31060 Fragaria vesca
Glyma.01G051400 Glycine max
Glyma.02G109900 Glycine max
Gohir.1Z049516 Gossypium hirsutum
Gohir.1Z049616 Gossypium hirsutum
Gohir.A04G146601 Gossypium hirsutum
Gohir.D04G191200 Gossypium hirsutum
Gorai.012G186600 Gossypium raimondii
GSVIVG01012614001 Vitis vinifera
GSVIVG01019950001 Vitis vinifera
HanXRQChr08g0224741 Helianthus annuus
HanXRQChr08g0225211 Helianthus annuus
HanXRQChr14g0429131 Helianthus annuus
HanXRQChr17g0540651 Helianthus annuus
Haze_11988 Corylus avellana
HPP92_001998 Vanilla planifolia
HPP92_001999 Vanilla planifolia
Hund25219 Selenicereus undatus
Lalb_Chr10g0098431 Lupinus albus
Lj2g0016635 Lotus japonicus
Lj3A852T53 Lonicera japonica
Lj3E852G2 Lonicera japonica
Lj3E852T1 Lonicera japonica
Lsat_1_v5_gn_1_53021 Lactuca sativa
Lsat_1_v5_gn_3_33900 Lactuca sativa
Lsat_1_v5_gn_3_92661 Lactuca sativa
Lsat_1_v5_gn_4_108040 Lactuca sativa
Lsat_1_v5_gn_8_32581 Lactuca sativa
Manes.01G034200 Manihot esculenta
Manes.05G104800 Manihot esculenta
Mapoly0102s0024 Marchantia polymorpha
MBI02_g24139_MAGBIO Magnolia biondii
MBI02_g24140_MAGBIO Magnolia biondii
MBI05_g14664_MAGBIO Magnolia biondii
MBI06_g33529_MAGBIO Magnolia biondii
MBI07_g23220_MAGBIO Magnolia biondii
MD16G1069300 Malus domestica
Medtr5g042000 Medicago truncatula
MELO3C002967.2 Cucumis melo
Migut.E00588 Erythranthe guttata
Nitab4.5_0000129g0280 Nicotiana tabacum
Nitab4.5_0001419g0070 Nicotiana tabacum
Nn1g04524 Nelumbo nucifera
Nn3g17298 Nelumbo nucifera
Oeu032954.1 Olea europaea
Oeu034639.1 Olea europaea
Oeu044046.4 Olea europaea
Oeu052406.1 Olea europaea
Os06g0562700 Oryza sativa ssp. japonica
Peaxi162Scf00329g00617 Petunia axillaris
PGR119G1944 Punica granatum
Phvul.003G045700 Phaseolus vulgaris
Potri.010G166100 Populus trichocarpa
Pp3c12_12730 Physcomitrium patens
Pp3c4_10880 Physcomitrium patens
Prupe.1G277900 Prunus persica
Psat2g116320 Pisum sativum
PSO013G0146 Papaver somniferum
PSO832G1080 Papaver somniferum
QL03p068116 Quercus lobata
QL03p068157 Quercus lobata
QL03p068414 Quercus lobata
QL03p068420 Quercus lobata
RcHm_v2.0_Chr3g0458311 Rosa chinensis
RcHm_v2.0_Chr4g0439441 Rosa chinensis
RcHm_v2.0_Chr7g0218771 Rosa chinensis
Rhsim04G0150600 Rhododendron simsii
Rhsim09G0077000 Rhododendron simsii
Sabra10G0126400 Salix brachista
Sc11g0002090 Simmondsia chinensis
Sed0022637 Sechium edule
SEGI_16638 Sequoiadendron giganteum
SGA_v2.0_scaffold140G35452 Striga asiatica
SHI24774 Sapria himalayana
SHI24778 Sapria himalayana
SMO172G0003 Selaginella moellendorffii
Solyc04g008680.4 Solanum lycopersicum
Sopen04g003850 Solanum pennellii
Sp2g14100 Schrenkiella parvula
TAR371G0293 Trochodendron aralioides
TAR629G1990 Trochodendron aralioides
THA.LOC104824075 Tarenaya hassleriana
Thecc.02G342500 Theobroma cacao
Thhalv10005550m.g Eutrema salsugineum
TPR.G11445 Trifolium pratense
TPR.G34709 Trifolium pratense
TWI75G1472 Tripterygium wilfordii
TWI79G0308 Tripterygium wilfordii
unitig_52.g17300 Utricularia gibba
unitig_52.g17301 Utricularia gibba
vmacro10769 Vaccinium macrocarpon
VMungo1215G3128 Vigna mungo
Zm00001eb277410 Zea mays
Zm00001eb384230 Zea mays

User provided reference genes

Program Settings