Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p37340 Brassica napus
Aa31LG1G20890 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2920 Anthoceros agrestis
Actinidia01442 Actinidia chinensis
Actinidia09891 Actinidia chinensis
Actinidia12449 Actinidia chinensis
Ah.01g003940 Amaranthus hybridus
AL1G13040 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.7D4Z5S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FC6AAX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IS01QF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SANC69 Arachis hypogaea
AT1G03530 Arabidopsis thaliana
ATR0693G407 Amborella trichopoda
Atru.chr6.3049 Acer truncatum
AUR62000198 Chenopodium quinoa
AUR62035735 Chenopodium quinoa
BcaB01g00913 Brassica carinata
BcaB02g06919 Brassica carinata
BcaB08g36101 Brassica carinata
BcaB08g36102 Brassica carinata
BcaC05g24523 Brassica carinata
BolC5t28977H Brassica oleracea
BolC8t46864H Brassica oleracea
BraA08t35631Z Brassica rapa
C05p01990 Brassica napus
C08p00660 Brassica napus
CAN.G78.83 Capsicum annuum
CAN.G996.7 Capsicum annuum
CANSAT64G2104 Cannabis sativa
CARHR002890 Cardamine hirsuta
Carub.0001s0267 Capsella rubella
Ca_20687_v3 Cicer arietinum L.
Ca_27565_v3 Cicer arietinum L.
CBR_g12767 Chara braunii
Cc00_g21120 Coffea canephora
CDE02G0135 Ceratophyllum demersum
CDE02G4059 Ceratophyllum demersum
Cfa014556 Carpinus fangiana
Ciclev10014470m.g Citrus clementina
CiPaw.03G171000 Carya illinoinensis
ClCG02G017410 Citrullus lanatus
COL.COLO4_08510 Corchorus olitorius
COL.COLO4_13701 Corchorus olitorius
Cpa.g.sc34.112 Carica papaya
Cre10.g467100 Chlamydomonas reinhardtii
CsaV3_2G036510 Cucumis sativus L.
CSS0039758 Camellia sinensis var. sinensis
DCAR_012988 Daucus carota
DCAR_019194 Daucus carota
Dinv15471 Davidia involucrata
Duzib052G0504 Durio zibethinus
Duzib106G1111 Durio zibethinus
ECA234G1777 Erigeron canadensis
ECA248G3233 Erigeron canadensis
EL10As5g23555 Beta vulgaris
Eucgr.B03848 Eucalyptus grandis
FAN02G1766 Fragaria x ananassa
FAN05G3704 Fragaria x ananassa
FAN09G2343 Fragaria x ananassa
FAN14G4866 Fragaria x ananassa
FvH4_6g44910 Fragaria vesca
Glyma.06G297000 Glycine max
Glyma.12G108100 Glycine max
Gohir.A13G144300 Gossypium hirsutum
Gohir.D13G149100 Gossypium hirsutum
Gorai.013G166800 Gossypium raimondii
GSVIVG01030569001 Vitis vinifera
HanXRQChr05g0140481 Helianthus annuus
HanXRQChr14g0441421 Helianthus annuus
Haze_13103 Corylus avellana
Hma1.2p1_0875F.1_g231553 Hydrangea macrophylla
Hma1.2p1_0875F.1_g231580 Hydrangea macrophylla
Hma1.2p1_1100F.1_g257070 Hydrangea macrophylla
HPP92_014062 Vanilla planifolia
Hund09647 Selenicereus undatus
Lalb_Chr01g0005391 Lupinus albus
Lalb_Chr22g0356411 Lupinus albus
Lj1C734T7 Lonicera japonica
Lj2g0025301 Lotus japonicus
Lj3g0000702 Lotus japonicus
Lj3g0023901 Lotus japonicus
Lsat_1_v5_gn_4_68860 Lactuca sativa
Manes.12G079600 Manihot esculenta
Mapoly0108s0039 Marchantia polymorpha
MBI02_g10548_MAGBIO Magnolia biondii
MBI02_g27223_MAGBIO Magnolia biondii
MBI02_g27224_MAGBIO Magnolia biondii
MBI02_g27225_MAGBIO Magnolia biondii
MCO05G032 Micromonas commoda
MD09G1092000 Malus domestica
MD17G1081900 Malus domestica
Medtr0072s0050 Medicago truncatula
Medtr2g090095 Medicago truncatula
Medtr7g116780 Medicago truncatula
MELO3C003861.2 Cucumis melo
MELO3C021880.2 Cucumis melo
Migut.H01030 Erythranthe guttata
MSTRG.14187 Avicennia marina
Nitab4.5_0003018g0070 Nicotiana tabacum
Nitab4.5_0007732g0010 Nicotiana tabacum
Nitab4.5_0009520g0030 Nicotiana tabacum
Nn1g03938 Nelumbo nucifera
Oeu025511.1 Olea europaea
Os05g0502800 Oryza sativa ssp. japonica
Peaxi162Scf00007g02845 Petunia axillaris
Peaxi162Scf00485g00032 Petunia axillaris
PGR042G3101 Punica granatum
PGSC0003DMG400018364 Solanum tuberosum
Phvul.011G112400 Phaseolus vulgaris
Potri.013G145300 Populus trichocarpa
Potri.019G104400 Populus trichocarpa
Pp3c10_10230 Physcomitrium patens
Pp3c14_14050 Physcomitrium patens
Prupe.3G233000 Prunus persica
Psat0s10217g0080 Pisum sativum
Psat0s4261g0040 Pisum sativum
Psat5g270160 Pisum sativum
PSO339G0229 Papaver somniferum
PSO339G0898 Papaver somniferum
PSO384G2677 Papaver somniferum
PSO541G0834 Papaver somniferum
PSO675G0516 Papaver somniferum
QL10p048480 Quercus lobata
RcHm_v2.0_Chr2g0162091 Rosa chinensis
Rhsim06G0149700 Rhododendron simsii
Sabra13G0117000 Salix brachista
SalBow1G4799 Salvia bowleyana
SalBow7G1236 Salvia bowleyana
Sc12g0002770 Simmondsia chinensis
Sed0007770 Sechium edule
SEGI_15076 Sequoiadendron giganteum
SEGI_25704 Sequoiadendron giganteum
SEGI_36208 Sequoiadendron giganteum
SGA_v2.0_scaffold159G37633 Striga asiatica
SGA_v2.0_scaffold49G18309 Striga asiatica
SHI10466 Sapria himalayana
SMO137G0274 Selaginella moellendorffii
Solyc07g054460.4 Solanum lycopersicum
Sopen07g028400 Solanum pennellii
Sp1g02460 Schrenkiella parvula
TAR627G0949 Trochodendron aralioides
TAR629G0893 Trochodendron aralioides
THA.LOC104826023 Tarenaya hassleriana
Thecc.02G173500 Theobroma cacao
Thhalv10006867m.g Eutrema salsugineum
Thhalv10024822m.g Eutrema salsugineum
TPR.G21660 Trifolium pratense
TPR.G27075 Trifolium pratense
TWI18G0514 Tripterygium wilfordii
TWI36G0730 Tripterygium wilfordii
unitig_26.g9937 Utricularia gibba
vmacro12267 Vaccinium macrocarpon
VMungo1127G2109 Vigna mungo
Zm00001eb092920 Zea mays
Zm00001eb137250 Zea mays
Zm00001eb137260 Zea mays
Zm00001eb292050 Zea mays

User provided reference genes

Program Settings