Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p31500 Brassica napus
Aa31LG3G3420 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.827 Anthoceros agrestis
Actinidia06707 Actinidia chinensis
Actinidia18578 Actinidia chinensis
Ah.03g136890 Amaranthus hybridus
Ah.16g102420 Amaranthus hybridus
AL6G14230 Arabidopsis lyrata
Aqoxy1G00240 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.48LUDE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CB8VHN Arachis hypogaea
AT5G04600 Arabidopsis thaliana
ATR0068G115 Amborella trichopoda
Atru.chr10.1244 Acer truncatum
Atru.chr12.969 Acer truncatum
AUR62003699 Chenopodium quinoa
AUR62018007 Chenopodium quinoa
BcaB01g05909 Brassica carinata
BcaC03g12939 Brassica carinata
BcaC06g32168 Brassica carinata
BcaC06g32170 Brassica carinata
BolC2t06157H Brassica oleracea
BolC9t59963H Brassica oleracea
BraA02t04819Z Brassica rapa
BraA10t45196Z Brassica rapa
C02p02000 Brassica napus
C09p72190 Brassica napus
CANSAT56G4487 Cannabis sativa
CARHR208690 Cardamine hirsuta
Carub.0006s0352 Capsella rubella
Ca_04982_v3 Cicer arietinum L.
Ca_11096_v3 Cicer arietinum L.
CBR_g11154 Chara braunii
Cc02_g10240 Coffea canephora
CDE04G0123 Ceratophyllum demersum
Cfa011225 Carpinus fangiana
Cfa013557 Carpinus fangiana
Cfa021710 Carpinus fangiana
Ciclev10013752m.g Citrus clementina
Ciclev10033004m.g Citrus clementina
CiPaw.01G204400 Carya illinoinensis
ClCG08G008100 Citrullus lanatus
COL.COLO4_14104 Corchorus olitorius
COL.COLO4_27310 Corchorus olitorius
COL.COLO4_33895 Corchorus olitorius
Cpa.g.sc128.48 Carica papaya
Cre08.g368500 Chlamydomonas reinhardtii
CsaV3_6G004080 Cucumis sativus L.
CSS0012030 Camellia sinensis var. sinensis
DCAR_001331 Daucus carota
DCAR_012470 Daucus carota
Dinv20840 Davidia involucrata
Dinv30656 Davidia involucrata
Duzib128G1105 Durio zibethinus
ECA238G4124 Erigeron canadensis
EL10Ac2g03709 Beta vulgaris
EL10Ac4g08675 Beta vulgaris
EL10Ac4g08678 Beta vulgaris
EL10Ac7g17659 Beta vulgaris
Eucgr.G02711 Eucalyptus grandis
FAN26G1691 Fragaria x ananassa
FvH4_5g27351 Fragaria vesca
Glyma.02G173000 Glycine max
Glyma.09G111400 Glycine max
Glyma.09G232800 Glycine max
Gohir.A13G011400 Gossypium hirsutum
Gohir.D13G012100 Gossypium hirsutum
Gorai.013G013300 Gossypium raimondii
GSVIVG01021851001 Vitis vinifera
HanXRQChr10g0319081 Helianthus annuus
HanXRQChr14g0456901 Helianthus annuus
Haze_02611 Corylus avellana
Haze_22178 Corylus avellana
Haze_26093 Corylus avellana
Hma1.2p1_0026F.1_g016750 Hydrangea macrophylla
Hma1.2p1_0567F.1_g180100 Hydrangea macrophylla
HPP92_008213 Vanilla planifolia
Hund06922 Selenicereus undatus
Hund13887 Selenicereus undatus
Lalb_Chr14g0365991 Lupinus albus
Lalb_Chr22g0354511 Lupinus albus
Lj3A931T47 Lonicera japonica
Lj6g0005217 Lotus japonicus
Lj6g0027575 Lotus japonicus
Lj9A82T44 Lonicera japonica
Lsat_1_v5_gn_2_86220 Lactuca sativa
Manes.05G202500 Manihot esculenta
Mapoly0059s0023 Marchantia polymorpha
MCO05G308 Micromonas commoda
MD08G1243300 Malus domestica
MD15G1436900 Malus domestica
MD15G1437000 Malus domestica
MD15G1437100 Malus domestica
Medtr1g108290 Medicago truncatula
Medtr4g127330 Medicago truncatula
MELO3C019883.2 Cucumis melo
Migut.F01706 Erythranthe guttata
MSTRG.412 Avicennia marina
Nitab4.5_0000442g0080 Nicotiana tabacum
Nitab4.5_0003470g0110 Nicotiana tabacum
Nn3g20167 Nelumbo nucifera
Oeu027977.1 Olea europaea
Oeu046197.1 Olea europaea
Oeu053518.1 Olea europaea
Oeu060262.1 Olea europaea
Os08g0412200 Oryza sativa ssp. japonica
Peaxi162Scf00150g00411 Petunia axillaris
PGR142G4346 Punica granatum
PGSC0003DMG400000462 Solanum tuberosum
PGSC0003DMG400007128 Solanum tuberosum
Phvul.005G089300 Phaseolus vulgaris
Potri.010G234800 Populus trichocarpa
Pp3c3_32540 Physcomitrium patens
Pp3c8_3240 Physcomitrium patens
PRCOL_00003387 Prasinoderma coloniale
Prupe.1G580700 Prunus persica
Psat1g082200 Pisum sativum
Psat6g221600 Pisum sativum
PSO063G7338 Papaver somniferum
PSO173G0033 Papaver somniferum
PSO210G0756 Papaver somniferum
PSO447G0101 Papaver somniferum
PSO478G2622 Papaver somniferum
PSO675G5749 Papaver somniferum
PSO717G0039 Papaver somniferum
QL04p041242 Quercus lobata
RcHm_v2.0_Chr4g0433501 Rosa chinensis
Rhsim03G0106100 Rhododendron simsii
Sabra10G0182000 Salix brachista
SalBow3G2087 Salvia bowleyana
SalBow6G2458 Salvia bowleyana
Sc09g0005570 Simmondsia chinensis
Sed0007729 Sechium edule
Sed0016970 Sechium edule
SGA_v2.0_scaffold10G05319 Striga asiatica
SGA_v2.0_scaffold113G31721 Striga asiatica
SGA_v2.0_scaffold154G37190 Striga asiatica
SMO117G0347 Selaginella moellendorffii
Solyc06g074720.4 Solanum lycopersicum
Sopen06g031130 Solanum pennellii
Sopen11g026360 Solanum pennellii
Sp6g38180 Schrenkiella parvula
TAR633G1318 Trochodendron aralioides
TAR633G2635 Trochodendron aralioides
THA.LOC104816458 Tarenaya hassleriana
THA.LOC104823192 Tarenaya hassleriana
Thecc.10G109700 Theobroma cacao
Thecc.K0008500 Theobroma cacao
Thhalv10014607m.g Eutrema salsugineum
TPR.G31410 Trifolium pratense
TPR.G32073 Trifolium pratense
TPR.G4853 Trifolium pratense
TWI38G0710 Tripterygium wilfordii
unitig_26.g9455 Utricularia gibba
vmacro07224 Vaccinium macrocarpon
vmacro21510 Vaccinium macrocarpon
VMungo1080G1669 Vigna mungo
Zm00001eb178930 Zea mays

User provided reference genes

Program Settings