Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p18950 Brassica napus
Aa31sc160G30 Aethionema arabicum
Aa31sc715G30 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.3376 Anthoceros agrestis
Actinidia06432 Actinidia chinensis
Actinidia22261 Actinidia chinensis
Actinidia22262 Actinidia chinensis
Ah.13g067790 Amaranthus hybridus
AL4G15160 Arabidopsis lyrata
Aqoxy7G02848 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.M0AD1K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W2ETIH Arachis hypogaea
AT2G24580 Arabidopsis thaliana
ATR0626G173 Amborella trichopoda
Atru.chr7.2661 Acer truncatum
AUR62020290 Chenopodium quinoa
AUR62037713 Chenopodium quinoa
BcaB06g27986 Brassica carinata
BcaC02g08437 Brassica carinata
BcaC02g08438 Brassica carinata
BolC4t26970H Brassica oleracea
BraA04t17495Z Brassica rapa
C04p54190 Brassica napus
CAN.G673.19 Capsicum annuum
CANSAT25G1430 Cannabis sativa
CARHR117360 Cardamine hirsuta
Carub.0004s0400 Capsella rubella
Ca_15651_v3 Cicer arietinum L.
Ca_15652_v3 Cicer arietinum L.
Ca_15659_v3 Cicer arietinum L.
Ca_15660_v3 Cicer arietinum L.
Ca_28680_v3 Cicer arietinum L.
Cc00_g13120 Coffea canephora
Cc08_g06480 Coffea canephora
Cc08_g06580 Coffea canephora
CDE02G4459 Ceratophyllum demersum
Cfa013283 Carpinus fangiana
Cfa013284 Carpinus fangiana
Cfa013285 Carpinus fangiana
Cfa013287 Carpinus fangiana
Ciclev10008459m.g Citrus clementina
Ciclev10008463m.g Citrus clementina
CiPaw.07G211300 Carya illinoinensis
CiPaw.08G020700 Carya illinoinensis
ClCG05G026450 Citrullus lanatus
COL.COLO4_19019 Corchorus olitorius
COL.COLO4_30024 Corchorus olitorius
Cpa.g.sc23.31 Carica papaya
Cre07.g312050 Chlamydomonas reinhardtii
Cre12.g493500 Chlamydomonas reinhardtii
CsaV3_3G047160 Cucumis sativus L.
CSS0030954 Camellia sinensis var. sinensis
DCAR_000687 Daucus carota
Dinv04517 Davidia involucrata
Duzib168G2341 Durio zibethinus
ECA247G3559 Erigeron canadensis
EL10Ac2g02417 Beta vulgaris
Eucgr.C04012 Eucalyptus grandis
Eucgr.C04014 Eucalyptus grandis
Eucgr.C04016 Eucalyptus grandis
FAN15G2443 Fragaria x ananassa
FAN20G1103 Fragaria x ananassa
FAN27G0985 Fragaria x ananassa
FvH4_2g36660 Fragaria vesca
Glyma.04G076300 Glycine max
Gohir.A06G104800 Gossypium hirsutum
Gohir.D06G106866 Gossypium hirsutum
Gohir.D06G107000 Gossypium hirsutum
Gorai.010G121400 Gossypium raimondii
Gorai.010G121600 Gossypium raimondii
GSVIVG01033177001 Vitis vinifera
HanXRQChr10g0282951 Helianthus annuus
HanXRQChr10g0282961 Helianthus annuus
HanXRQChr15g0466441 Helianthus annuus
HanXRQChr16g0519911 Helianthus annuus
Haze_21761 Corylus avellana
Hma1.2p1_1588F.1_g292320 Hydrangea macrophylla
HPP92_017393 Vanilla planifolia
Hund13109 Selenicereus undatus
Lalb_Chr11g0064181 Lupinus albus
Lalb_Chr23g0269171 Lupinus albus
Lj1g0024454 Lotus japonicus
Lj7P748T39 Lonicera japonica
Lsat_1_v5_gn_9_4341 Lactuca sativa
Manes.03G004800 Manihot esculenta
Manes.16G134500 Manihot esculenta
Mapoly0152s0014 Marchantia polymorpha
MBI13_g34048_MAGBIO Magnolia biondii
MBI16_g05839_MAGBIO Magnolia biondii
MD08G1126500 Malus domestica
MD15G1106400 Malus domestica
Medtr3g108990 Medicago truncatula
Medtr3g109010 Medicago truncatula
MELO3C003620.2 Cucumis melo
Migut.A00428 Erythranthe guttata
MSTRG.25795 Avicennia marina
Nitab4.5_0000555g0200 Nicotiana tabacum
Nitab4.5_0004131g0050 Nicotiana tabacum
Nn8g40733 Nelumbo nucifera
Oeu008773.1 Olea europaea
Oeu018556.1 Olea europaea
Os01g0316100 Oryza sativa ssp. japonica
Os09g0498500 Oryza sativa ssp. japonica
Os12g0543600 Oryza sativa ssp. japonica
Peaxi162Scf00045g01734 Petunia axillaris
PGR044G1507 Punica granatum
PGSC0003DMG400026320 Solanum tuberosum
Phvul.009G102000 Phaseolus vulgaris
Potri.006G272800 Populus trichocarpa
Potri.018G008700 Populus trichocarpa
Pp3c9_3640 Physcomitrium patens
PRCOL_00000645 Prasinoderma coloniale
Prupe.1G458600 Prunus persica
Prupe.1G458800 Prunus persica
Prupe.1G458900 Prunus persica
Psat0s2347g0040 Pisum sativum
Psat5g024080 Pisum sativum
Psat5g025320 Pisum sativum
PSO063G3790 Papaver somniferum
PSO170G4894 Papaver somniferum
QL12p025440 Quercus lobata
QL12p025516 Quercus lobata
RcHm_v2.0_Chr6g0305131 Rosa chinensis
Rhsim10G0084800 Rhododendron simsii
Sabra06G0211200 Salix brachista
Sabra18G0013200 Salix brachista
Sabra18G0015700 Salix brachista
SalBow4G0906 Salvia bowleyana
Sc07g0007360 Simmondsia chinensis
Sed0023873 Sechium edule
SEGI_11947 Sequoiadendron giganteum
SEGI_31206 Sequoiadendron giganteum
SGA_v2.0_scaffold193G40672 Striga asiatica
SMO115G0125 Selaginella moellendorffii
Solyc08g006430.4 Solanum lycopersicum
Sopen08g002370 Solanum pennellii
Sp4g03570 Schrenkiella parvula
TAR383G0560 Trochodendron aralioides
TAR383G1032 Trochodendron aralioides
TAR625G0669 Trochodendron aralioides
THA.LOC104819936 Tarenaya hassleriana
Thecc.09G008600 Theobroma cacao
Thhalv10000150m.g Eutrema salsugineum
TPR.G12332 Trifolium pratense
TPR.G12360 Trifolium pratense
TPR.G12429 Trifolium pratense
TWI32G0020 Tripterygium wilfordii
unitig_32.g11237 Utricularia gibba
unitig_32.g11238 Utricularia gibba
unitig_32.g11239 Utricularia gibba
unitig_748.g7722 Utricularia gibba
vmacro18918 Vaccinium macrocarpon
VMungo1041G0001 Vigna mungo
VMungo1309G1783 Vigna mungo
Zm00001eb127180 Zea mays
Zm00001eb140430 Zea mays
Zm00001eb317190 Zea mays
Zm00001eb340420 Zea mays

User provided reference genes

Program Settings