Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p21150 Brassica napus
Aa31LG11G11410 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3226 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3227 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5277 Anthoceros agrestis
Actinidia15158 Actinidia chinensis
Ah.04g149960 Amaranthus hybridus
AL2G37320 Arabidopsis lyrata
Aqoxy6G02084 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9SPN5G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FR9HZZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J7270J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WMJ7PV Arachis hypogaea
AT1G77140 Arabidopsis thaliana
ATR0706G031 Amborella trichopoda
Atru.chr13.1721 Acer truncatum
AUR62018460 Chenopodium quinoa
AUR62020958 Chenopodium quinoa
BcaB02g07097 Brassica carinata
BcaB05g25023 Brassica carinata
BcaC07g36896 Brassica carinata
BcaC08g45465 Brassica carinata
BcaC08g45467 Brassica carinata
BcaC08g45487 Brassica carinata
BolC2t09452H Brassica oleracea
BolC2t09460H Brassica oleracea
BolC6t38256H Brassica oleracea
BolC6t38277H Brassica oleracea
BraA02t07132Z Brassica rapa
BraA07t30433Z Brassica rapa
BraA07t30434Z Brassica rapa
BraA07t30435Z Brassica rapa
BraA07t30436Z Brassica rapa
C02p34300 Brassica napus
C04p54450 Brassica napus
C06p30970 Brassica napus
C06p30980 Brassica napus
C06p30990 Brassica napus
C06p31110 Brassica napus
C06p31120 Brassica napus
C06p31340 Brassica napus
C06p31350 Brassica napus
C06p31440 Brassica napus
CAN.G744.14 Capsicum annuum
CANSAT25G2177 Cannabis sativa
CARHR070630 Cardamine hirsuta
Carub.0002s2403 Capsella rubella
Ca_16654_v3 Cicer arietinum L.
CBR_g40854 Chara braunii
Cc03_g13150 Coffea canephora
CDE02G4342 Ceratophyllum demersum
CDE06G0573 Ceratophyllum demersum
CDE06G0844 Ceratophyllum demersum
Cfa018360 Carpinus fangiana
Ciclev10000721m.g Citrus clementina
CiPaw.15G021200 Carya illinoinensis
CiPaw.16G017400 Carya illinoinensis
ClCG08G006480 Citrullus lanatus
COL.COLO4_03835 Corchorus olitorius
COL.COLO4_38311 Corchorus olitorius
COL.COLO4_38312 Corchorus olitorius
Cpa.g.sc49.56 Carica papaya
Cpa.g.sc49.57 Carica papaya
Cpa.g.sc49.59 Carica papaya
Cre07.g333950 Chlamydomonas reinhardtii
CsaV3_6G030940 Cucumis sativus L.
CSS0027392 Camellia sinensis var. sinensis
DCAR_023123 Daucus carota
Dinv41118 Davidia involucrata
Duzib041G0052 Durio zibethinus
Duzib093G0819 Durio zibethinus
ECA232G5048 Erigeron canadensis
EL10Ac5g10990 Beta vulgaris
Eucgr.F02736 Eucalyptus grandis
FAN15G1625 Fragaria x ananassa
FAN20G3136 Fragaria x ananassa
FAN24G3481 Fragaria x ananassa
FAN27G2999 Fragaria x ananassa
FvH4_2g14590 Fragaria vesca
Glyma.04G240400 Glycine max
Glyma.06G123000 Glycine max
Gohir.A02G108700 Gossypium hirsutum
Gohir.D03G061100 Gossypium hirsutum
Gorai.013G105000 Gossypium raimondii
GSVIVG01010038001 Vitis vinifera
GSVIVG01024226001 Vitis vinifera
HanXRQChr09g0275251 Helianthus annuus
Haze_17715 Corylus avellana
Hma1.2p1_0107F.1_g051470 Hydrangea macrophylla
HPP92_000105 Vanilla planifolia
Lalb_Chr11g0066451 Lupinus albus
Lalb_Chr23g0271371 Lupinus albus
Lj1g0025718 Lotus japonicus
Lj4A692G26 Lonicera japonica
Lsat_1_v5_gn_0_22420 Lactuca sativa
Lsat_1_v5_gn_5_189221 Lactuca sativa
Lsat_1_v5_gn_9_77820 Lactuca sativa
Manes.02G175600 Manihot esculenta
Manes.18G088000 Manihot esculenta
Mapoly0133s0009 Marchantia polymorpha
MBI11_g07422_MAGBIO Magnolia biondii
MCO01G317 Micromonas commoda
MD05G1016500 Malus domestica
MD10G1016000 Malus domestica
MD10G1016100 Malus domestica
Medtr3g090170 Medicago truncatula
MELO3C008406.2 Cucumis melo
Migut.N03233 Erythranthe guttata
MSTRG.24197 Avicennia marina
Nitab4.5_0000299g0160 Nicotiana tabacum
Nitab4.5_0010241g0020 Nicotiana tabacum
Nn5g28636 Nelumbo nucifera
Oeu014477.2 Olea europaea
Os02g0437800 Oryza sativa ssp. japonica
Peaxi162Scf00263g00417 Petunia axillaris
PGR042G0484 Punica granatum
Phvul.009G135100 Phaseolus vulgaris
Potri.002G071600 Populus trichocarpa
Potri.005G188000 Populus trichocarpa
Pp3c18_21360 Physcomitrium patens
PRCOL_00003824 Prasinoderma coloniale
Prupe.8G019800 Prunus persica
Psat7g096680 Pisum sativum
PSO017G6839 Papaver somniferum
PSO170G1270 Papaver somniferum
QL02p025237 Quercus lobata
QL09p046738 Quercus lobata
QL09p046766 Quercus lobata
QL09p046848 Quercus lobata
RcHm_v2.0_Chr6g0277061 Rosa chinensis
Rhsim02G0231500 Rhododendron simsii
Sabra05G0143600 Salix brachista
SalBow6G5540 Salvia bowleyana
Sc02g0000500 Simmondsia chinensis
Sed0000192 Sechium edule
SEGI_30655 Sequoiadendron giganteum
SEGI_33438 Sequoiadendron giganteum
SGA_v2.0_scaffold19G08652 Striga asiatica
SGA_v2.0_scaffold25G11162 Striga asiatica
SHI09397 Sapria himalayana
SHI09399 Sapria himalayana
SHI15449 Sapria himalayana
SMO118G0298 Selaginella moellendorffii
Solyc04g064820.3 Solanum lycopersicum
Sopen04g026780 Solanum pennellii
Sp5g32320 Schrenkiella parvula
TAR381G1517 Trochodendron aralioides
THA.LOC104810036 Tarenaya hassleriana
Thecc.08G145200 Theobroma cacao
Thhalv10018344m.g Eutrema salsugineum
TPR.G18763 Trifolium pratense
TWI15G0549 Tripterygium wilfordii
TWI60G0810 Tripterygium wilfordii
unitig_52.g17535 Utricularia gibba
unitig_52.g17536 Utricularia gibba
vmacro05453 Vaccinium macrocarpon
VMungo1309G3090 Vigna mungo
Zm00001eb172280 Zea mays

User provided reference genes

Program Settings