Gene: AT1G77140

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G77140
  • Transcript Identifier AT1G77140.1
  • Gene Type Coding gene
  • Location Chr1 : 28984163-28987681 : positive

Gene Family Information

  • ID HOM05D004566
  • #Genes/#Species 158/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G77140.1
  • symbol VPS45
  • Alias ATVPS45,BEN2,bfa-visualized endocytic trafficking defective 2
  • uniprot O49048

Descriptions

  • Description vacuolar protein sorting 45
  • Computational description vacuolar protein sorting 45 (VPS45); CONTAINS InterPro DOMAIN/s: Sec1-like protein (InterPro:IPR001619); BEST Arabidopsis thaliana protein match is: secretory 1A (TAIR:AT1G02010.1); Has 1795 Blast hits to 1777 proteins in 228 species: Archae - 0; Bacteria - 2; Metazoa - 694; Fungi - 525; Plants - 216; Viruses - 0; Other Eukaryotes - 358 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006886
IGI
IBA
Gene Ontologyintracellular protein transport1 2
GO:0016192
IEA
GOA Databasevesicle-mediated transport
GO:0016192
IBA
Gene Ontologyvesicle-mediated transport2
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0015031
IEA
GOA Databaseprotein transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005794
IEA
GOA DatabaseGolgi apparatus
GO:0005794
ISM
Gene OntologyGolgi apparatus
GO:0005802
IDA
NAS
Gene Ontologytrans-Golgi network3
GO:0005739
HDA
Gene Ontologymitochondrion4
GO:0009705
IDA
Gene Ontologyplant-type vacuole membrane1
GO:0000139
IBA
Gene OntologyGolgi membrane2
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR043127 Sec1-like, domain 3a
IPR036045 Sec1-like superfamily
IPR043154 Sec1-like, domain 1
IPR001619 Sec1-like protein
IPR027482 Sec1-like, domain 2
Mapman id Description
22.3.5.2.1 Vesicle trafficking.post-Golgi trafficking.target membrane fusion.regulation.regulatory protein (VPS45)