Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p00930 Brassica napus
A10p32880 Brassica napus
Aa31LG1G22060 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2458 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1766 Anthoceros agrestis
Actinidia11233 Actinidia chinensis
Actinidia19722 Actinidia chinensis
Ah.14g084480 Amaranthus hybridus
AL6G12120 Arabidopsis lyrata
Aqoxy4G02198 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.52IM1F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5U6P8X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6MTV2V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CZIV0N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LN9G9C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.URH0Q0 Arachis hypogaea
AT5G02850 Arabidopsis thaliana
ATR0584G245 Amborella trichopoda
ATR0594G066 Amborella trichopoda
ATR0950G002 Amborella trichopoda
Atru.chr8.2543 Acer truncatum
AUR62025361 Chenopodium quinoa
AUR62028362 Chenopodium quinoa
BcaB01g05872 Brassica carinata
BcaC06g32015 Brassica carinata
BolC3t12680H Brassica oleracea
BolC9t60115H Brassica oleracea
BraA03t09475Z Brassica rapa
C03p01200 Brassica napus
C09p73810 Brassica napus
CAN.G206.55 Capsicum annuum
CAN.G525.45 Capsicum annuum
CANSAT56G3582 Cannabis sativa
CARHR210480 Cardamine hirsuta
Carub.0006s0165 Capsella rubella
Ca_19605_v3 Cicer arietinum L.
Ca_22379_v3 Cicer arietinum L.
CBR_g38095 Chara braunii
Cc00_g23990 Coffea canephora
Cc03_g15870 Coffea canephora
CDE04G3741 Ceratophyllum demersum
CDE07G0444 Ceratophyllum demersum
Cfa017496 Carpinus fangiana
Ciclev10011831m.g Citrus clementina
CiPaw.09G181100 Carya illinoinensis
ClCG04G008790 Citrullus lanatus
ClCG10G016170 Citrullus lanatus
COL.COLO4_27097 Corchorus olitorius
Cpa.g.sc10.80 Carica papaya
CsaV3_4G024350 Cucumis sativus L.
CSS0033785 Camellia sinensis var. sinensis
CSS0042772 Camellia sinensis var. sinensis
DCAR_002493 Daucus carota
DCAR_009290 Daucus carota
Dinv37242 Davidia involucrata
Duzib106G1297 Durio zibethinus
EL10Ac7g16819 Beta vulgaris
Eucgr.J03059 Eucalyptus grandis
FAN01G0370 Fragaria x ananassa
FAN01G0473 Fragaria x ananassa
FAN03G1811 Fragaria x ananassa
FAN03G3426 Fragaria x ananassa
FAN06G0991 Fragaria x ananassa
FAN06G2894 Fragaria x ananassa
FAN06G3324 Fragaria x ananassa
FAN06G4506 Fragaria x ananassa
FAN14G1867 Fragaria x ananassa
FvH4_6g20640 Fragaria vesca
FvH4_7g16920 Fragaria vesca
FvH4_7g17650 Fragaria vesca
Glyma.06G188800 Glycine max
Glyma.08G287300 Glycine max
Glyma.13G067700 Glycine max
Gohir.A03G063400 Gossypium hirsutum
Gohir.D03G102900 Gossypium hirsutum
Gorai.003G108400 Gossypium raimondii
HanXRQChr05g0156781 Helianthus annuus
Haze_20666 Corylus avellana
HPP92_012944 Vanilla planifolia
Hund08942 Selenicereus undatus
Lalb_Chr05g0229841 Lupinus albus
Lj3E543T1 Lonicera japonica
Lj3g0026232 Lotus japonicus
Lj4g0012826 Lotus japonicus
Lj5g0019559 Lotus japonicus
Lj6g0002066 Lotus japonicus
Lj6g0013650 Lotus japonicus
Lj6g0014683 Lotus japonicus
Lsat_1_v5_gn_5_8941 Lactuca sativa
Lsat_1_v5_gn_8_95180 Lactuca sativa
Lsat_1_v5_gn_8_95200 Lactuca sativa
Manes.08G002200 Manihot esculenta
Manes.09G079900 Manihot esculenta
Manes.09G080009 Manihot esculenta
Mapoly0007s0084 Marchantia polymorpha
MBI18_g25517_MAGBIO Magnolia biondii
MCO09G463 Micromonas commoda
Medtr6g089780 Medicago truncatula
Medtr8g075790 Medicago truncatula
MELO3C014263.2 Cucumis melo
Migut.K00511 Erythranthe guttata
MSTRG.16520 Avicennia marina
Nitab4.5_0001952g0150 Nicotiana tabacum
Nitab4.5_0005206g0040 Nicotiana tabacum
Nitab4.5_0006780g0010 Nicotiana tabacum
Nitab4.5_0006780g0020 Nicotiana tabacum
Nitab4.5_0008076g0010 Nicotiana tabacum
Nn1g07079 Nelumbo nucifera
Oeu026072.1 Olea europaea
Oeu029550.1 Olea europaea
Os09g0540500 Oryza sativa ssp. japonica
Peaxi162Scf00569g00015 Petunia axillaris
PGR004G2024 Punica granatum
PGSC0003DMG400000510 Solanum tuberosum
PGSC0003DMG400023633 Solanum tuberosum
Phvul.003G261400 Phaseolus vulgaris
Potri.016G084200 Populus trichocarpa
Pp3c14_11490 Physcomitrium patens
Prupe.2G197600 Prunus persica
Psat4g100360 Pisum sativum
Psat7g019080 Pisum sativum
PSO210G6420 Papaver somniferum
PSO675G1725 Papaver somniferum
PSO832G0086 Papaver somniferum
QL07p045485 Quercus lobata
RcHm_v2.0_Chr1g0360161 Rosa chinensis
RcHm_v2.0_Chr1g0361081 Rosa chinensis
Rhsim10G0168100 Rhododendron simsii
Rhsim11G0041500 Rhododendron simsii
Rhsim11G0041800 Rhododendron simsii
RhsimUnG0119000 Rhododendron simsii
Sabra16G0091200 Salix brachista
SalBow4G1233 Salvia bowleyana
Sc07g0006230 Simmondsia chinensis
Sed0010830 Sechium edule
SEGI_01207 Sequoiadendron giganteum
SEGI_11500 Sequoiadendron giganteum
SGA_v2.0_scaffold204G41624 Striga asiatica
SGA_v2.0_scaffold94G28661 Striga asiatica
SHI12593 Sapria himalayana
Solyc02g087180.4 Solanum lycopersicum
Solyc04g014240.1 Solanum lycopersicum
Sopen02g031920 Solanum pennellii
Sopen04g006350 Solanum pennellii
Sp6g39730 Schrenkiella parvula
TAR369G0596 Trochodendron aralioides
THA.LOC104823245 Tarenaya hassleriana
THA.LOC104827455 Tarenaya hassleriana
Thecc.05G052700 Theobroma cacao
Thhalv10013588m.g Eutrema salsugineum
TPR.G27980 Trifolium pratense
TPR.G33503 Trifolium pratense
TWI53G0358 Tripterygium wilfordii
unitig_899.g15236 Utricularia gibba
vmacro04719 Vaccinium macrocarpon
VMungo0251G2800 Vigna mungo
VMungo0647G0506 Vigna mungo
Zm00001eb103820 Zea mays

User provided reference genes

Program Settings